prot_P-canaliculata_contig97354.23823.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97354.23823.1
Unique Nameprot_P-canaliculata_contig97354.23823.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length160
Homology
BLAST of mRNA_P-canaliculata_contig97354.23823.1 vs. uniprot
Match: UPI0016728BED (hypothetical protein n=1 Tax=Streptomyces hiroshimensis TaxID=66424 RepID=UPI0016728BED)

HSP 1 Score: 53.5 bits (127), Expect = 2.120e-6
Identity = 31/98 (31.63%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    1 MKHIPTEIRSYIRFFAFFIGNGSLGAVFNEFPDYDT-LLDSEDFLPSLVAVFVNNLDLEGKRCV---GPPKKCAWQYVRMQLDAEFKPDLQYGSIETD 94
            M H+PT++R+ +RFFAF++GNG+L     +  DY   LL+S   L  + A+F N L+++ +      G  +  A Q++R + D +++ +  +   ET+
Sbjct:    1 MAHLPTDVRAALRFFAFYLGNGTLDLELLDGIDYRARLLESGSDLEMVFAIFTNVLEVDDQGQTVNDGDAQYRAAQWIRRRCDPDYQVEPPFEPWETE 98          
BLAST of mRNA_P-canaliculata_contig97354.23823.1 vs. uniprot
Match: A0A2Z4UWG4_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces sp. ICC1 TaxID=2099583 RepID=A0A2Z4UWG4_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 2.970e-6
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    1 MKHIPTEIRSYIRFFAFFIGNGSLGAVFNEFPDYDT-LLDSEDFLPSLVAVFVNNLDLEGKRCV---GPPKKCAWQYVRMQLDAEFKPDLQYGSIETD 94
            M H+PT++R+ +RFFAF++GNG+L     E  DY   LL+    L  + A+F N L+++        G  +  A Q++R  LD  ++ +  + + ET+
Sbjct:    1 MTHLPTDVRAALRFFAFYLGNGTLDVDLLEGIDYRAHLLEFGSDLEMIFAIFANVLEVDDHGQTLNDGDAQYRAAQWIRRSLDPGYRVEPPFEAWETE 98          
BLAST of mRNA_P-canaliculata_contig97354.23823.1 vs. uniprot
Match: UPI001F27B19F (hypothetical protein n=1 Tax=Streptomyces sp. NRRL S-237 TaxID=1463895 RepID=UPI001F27B19F)

HSP 1 Score: 53.1 bits (126), Expect = 3.930e-6
Identity = 32/98 (32.65%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    1 MKHIPTEIRSYIRFFAFFIGNGSLGAVFNEFPDY-DTLLDSEDFLPSLVAVFVNNLDLEGKRCV---GPPKKCAWQYVRMQLDAEFKPDLQYGSIETD 94
            + H+PT++R+ +RFFAFF+GNG+L     E  DY + L      L  ++AVF N L+++        G  +  A Q++R + D E++ +  + + ET+
Sbjct:   14 VAHLPTDVRAALRFFAFFLGNGTLDVELLEGIDYREHLFTYGSDLEMVIAVFTNVLEVDDHGRTLNDGDAQYRAAQWIRGRCDPEYRVEPPFEAWETE 111          
BLAST of mRNA_P-canaliculata_contig97354.23823.1 vs. uniprot
Match: UPI0004BD0DF0 (hypothetical protein n=1 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI0004BD0DF0)

HSP 1 Score: 50.1 bits (118), Expect = 4.360e-5
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    1 MKHIPTEIRSYIRFFAFFIGNGSLGAVFNEFPDY-DTLLDSEDFLPSLVAVFVNNL--DLEGKRCV-GPPKKCAWQYVRMQLDAEFKPDLQYGSIETD 94
            M H+P+++R+ +RFFAFF+GNG+L     +  DY + LL     L  + A+F N L  D +G+    G  +  A Q+VR + D +++    + + ET+
Sbjct:    1 MTHLPSDVRAALRFFAFFLGNGTLAVELLDGIDYREHLLTFGSDLEMIFAIFANVLRVDDDGQTLNDGDAQYRAAQWVRARCDPDYEVQPPFEAWETE 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97354.23823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI0016728BED2.120e-631.63hypothetical protein n=1 Tax=Streptomyces hiroshim... [more]
A0A2Z4UWG4_9ACTN2.970e-632.65Uncharacterized protein n=1 Tax=Streptomyces sp. I... [more]
UPI001F27B19F3.930e-632.65hypothetical protein n=1 Tax=Streptomyces sp. NRRL... [more]
UPI0004BD0DF04.360e-533.67hypothetical protein n=1 Tax=unclassified Streptom... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97354contigP-canaliculata_contig97354:540..1019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97354.23823.1mRNA_P-canaliculata_contig97354.23823.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97354 540..1019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97354.23823.1 ID=prot_P-canaliculata_contig97354.23823.1|Name=mRNA_P-canaliculata_contig97354.23823.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=160bp
MKHIPTEIRSYIRFFAFFIGNGSLGAVFNEFPDYDTLLDSEDFLPSLVAV
FVNNLDLEGKRCVGPPKKCAWQYVRMQLDAEFKPDLQYGSIETDPTRHDD
YRQDICQFARHIAVGTFPRLQETGGYLDYWTSGSGLELLFAVYCNVAELD
RDLRVSNHEF
back to top