Homology
BLAST of mRNA_P-canaliculata_contig973.23812.1 vs. uniprot
Match:
A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)
HSP 1 Score: 72.0 bits (175), Expect = 3.070e-9
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 339 TGDPPWRATWEEGFDNESALGGGLLMSLSAMEEYEGKSHEESRLEDYARNRKNNLAVGCGPLD-GATPKS 407
TG+P WR T E ++ G+L S+SAM+EYEGKSHEE R+EDY NRKN+LAV G GA P S
Sbjct: 215 TGNPAWRETRAEDPTGKAGANPGMLQSISAMKEYEGKSHEELRVEDYLLNRKNSLAVTAGATAAGAAPSS 284
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig973.23812.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
50 100 150 200 250 300 350 400 450 500 550 600 Expect = 3.07e-9 / Id = 54.29 Sequence A0A6H5K9B1_9PHAE
Match Name E-value Identity Description
A0A6H5K9B1_9PHAE 3.070e-9 54.29 Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 400 450 500 550 600 Expect = 5.0E-9 / Score = 38.0 Expect = 1.4E-7 / Score = 33.3 Expect = 3.8E-9 / Score = 38.4 Expect = 6.2E-8 / Score = 34.5 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence G3DSA:1.10.10.2360 CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE PTHR23198:SF6 PTHR23198:SF6 PTHR23198:SF6 PTHR23198 PTHR23198 PTHR23198
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 1.10.10.2360 coord: 429..476 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 527..633 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..506 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 507..526 IPR037637 Nuclear pore complex protein NUP98-NUP96 PANTHER PTHR23198:SF6 NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96 coord: 155..393 IPR037637 Nuclear pore complex protein NUP98-NUP96 PANTHER PTHR23198:SF6 NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96 coord: 419..480 IPR037637 Nuclear pore complex protein NUP98-NUP96 PANTHER PTHR23198:SF6 NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96 coord: 564..633 IPR037665 Nucleoporin peptidase S59-like PANTHER PTHR23198 NUCLEOPORIN coord: 564..633 IPR037665 Nucleoporin peptidase S59-like PANTHER PTHR23198 NUCLEOPORIN coord: 504..554 IPR037665 Nucleoporin peptidase S59-like PANTHER PTHR23198 NUCLEOPORIN coord: 419..480
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig973.23812.1 ID=prot_P-canaliculata_contig973.23812.1|Name=mRNA_P-canaliculata_contig973.23812.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=634bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: