prot_P-canaliculata_contig97214.23807.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97214.23807.1
Unique Nameprot_P-canaliculata_contig97214.23807.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length77
Homology
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BLAST of mRNA_P-canaliculata_contig97214.23807.1 vs. uniprot
Match: M5T5D6_9BACT (Uncharacterized protein n=3 Tax=Rhodopirellula TaxID=265488 RepID=M5T5D6_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 7.620e-8
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:    1 MAIAGGRLDEAAKLLQ-----SSAVAKHATGQRLSDRLITELLKRAQLHLDQGRLQPARIDADLAGRFGGQQVAVHELLQRI 77
            +A+  GRLDEA  L+Q     SS    H   Q L+DR+I+EL++R   H D+ R   A+ DAD A + GG+Q+ + +L  RI
Sbjct:   60 LALDAGRLDEAFTLIQFALLKSSPYRHHHETQMLTDRIISELIRRGNQHFDEQRPDDAQYDADAAFQLGGRQIEIAKLRHRI 141
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97214.23807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
M5T5D6_9BACT7.620e-841.46Uncharacterized protein n=3 Tax=Rhodopirellula Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97214contigP-canaliculata_contig97214:191..421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97214.23807.1mRNA_P-canaliculata_contig97214.23807.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97214 161..421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97214.23807.1 ID=prot_P-canaliculata_contig97214.23807.1|Name=mRNA_P-canaliculata_contig97214.23807.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=77bp
MAIAGGRLDEAAKLLQSSAVAKHATGQRLSDRLITELLKRAQLHLDQGRL
QPARIDADLAGRFGGQQVAVHELLQRI
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