prot_P-canaliculata_contig97194.23804.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97194.23804.1
Unique Nameprot_P-canaliculata_contig97194.23804.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length360
Homology
BLAST of mRNA_P-canaliculata_contig97194.23804.1 vs. uniprot
Match: A0A518ER40_9BACT (Tetratricopeptide repeat protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ER40_9BACT)

HSP 1 Score: 301 bits (772), Expect = 2.740e-94
Identity = 169/365 (46.30%), Postives = 223/365 (61.10%), Query Frame = 0
Query:    1 IEAEGHESNDLDYVIGAARYALGKAEEAKGSPSAGGLYGEAAAYLADVTAKAPDDYPDAWRMLAAAARWTGDMELAGSAITSAVKLEQSAATLTLAAKIRVALGAAMIGDEGTKAEGMRYIEQGVKDAEAAAKALGDEKRAAPAIADVQLQRAVGLLFLGRKEDAAKAYVDAIGWDPTQVDYAQLLGSLRSEKDGDKLFIDTLEQAAAAFEKRWGSKLNSDATLHWYRGYAQHFAQDYAGSTESFEKSVAKFPSFTNAYWYIGANHAWTEGADGTA-AADAWMTYLELDKDGFLNTLRTDKTATGYVGRVIGMLWNNSRG----GANLETSAILAELNLESDPTNAKFWNNVGLMSRDAGAWVKE 360
            +E+   + + + Y IG  RY   K EEA+G    GG + EA  YL D    APD +PDAWRMLA +ARW GD + A  AI  A++  + AATL LAAKIRVA G+AM+G + TK  G R I QGV+DA AA KALG +K  A A+AD+ LQ  VGLLFL +K++AA AY +A+GWDPTQVDY QL G     +   + F+D L+  A  FE  WG  + SDA L W+ GY Q    DY  +  +FE +V KFP+F N+YWYIG +  + +G +    AA +W  Y  +D+DGF+ T+  D T    +      L+ N  G    G  +E +A + EL L +DP+NAK+WNNVGL  RDAG  V +
Sbjct:  100 LESTVEDPSLMAYAIGTGRYLFAKREEARGGDP-GGAFDEARGYLKDAIDVAPDAFPDAWRMLAESARWVGDQDTASMAIGRALETSKDAATLGLAAKIRVAAGSAMLGSDDTKDAGKRMITQGVEDARAAIKALGAKKENAVALADLNLQLGVGLLFLEKKDEAADAYAEAMGWDPTQVDYGQLFGIFTDAEGTSRPFVDALDAGATKFESHWGKNIASDAGLRWWLGYGQQRLGDYDDAIANFEAAVQKFPAFANSYWYIGLSK-YNKGIENYEDAAKSWRQYATVDRDGFIATVNGDPTNIRILDFAGAKLYGNGMGRNNNGMGMEAAADIYELVLMTDPSNAKYWNNVGLFHRDAGQVVAQ 462          
BLAST of mRNA_P-canaliculata_contig97194.23804.1 vs. uniprot
Match: A0A2E5X3L9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X3L9_9BACT)

HSP 1 Score: 141 bits (356), Expect = 5.650e-34
Identity = 117/361 (32.41%), Postives = 181/361 (50.14%), Query Frame = 0
Query:    1 IEAEGHESNDLDYVIGAARYALGKAEEAKG--SPSAGGLYGEAAAYLADVTAKAPDDYPDAWRMLAAAARWTGDMELAGSAITSAVKLEQSAATLT-LAAKIRVALGAAMIGDEGTKAEGMRYIEQGVKDAEAAAKALGDEKRAAPAIADVQLQRAVG--LLFLGRKEDAAKAYVDAIGWDPTQVDYAQLLGSLRSEKDGDKLFIDTLEQAAAAFEKRWGSKLNSDATLHWYRGYAQHFAQDYAGSTESFEKSVAKFPSFTNAYWYIGAN--HAWTEGADGTAAADAWMTYLELDKDGFLNTLRTDK-TATGYVGRVIGMLWNNSRGGANLETSAILAELNLESDPTNAKFWNNVGLMSRD 353
            + A G     +DY+ G A +  G +  A+G    S G  + +A  YL   T  AP ++PDAW  LA AA +  D+ +A  A   AV L++  A    +  ++ ++   A+  D G  A+   + +Q  +  E+    L   K AA      +LQ  +G  LL+  + E A +AY DA+GWDPT VDY QL  SL +E       + +LE  A AF +  G++ N+DATL W+ GYA+  A DYAG+ ++F   VAK+P + N+++Y+G +  H       G A A  W    + D +  + ++  ++ T T     VIG L    +       +A L+E    S P + +F NN GL  R+
Sbjct:   97 LVASGLGGERIDYLFGMAFHGKGASYLAQGVRDSSVGMAFNDALGYLLSATEAAPAEFPDAWSPLAEAAWYGQDLLVARDAAEKAVALDKRDANAAYVLGRVALSQFVAVKDDSGRTADAEEHHKQARRAFESGISILRKPKEAAAKALLAKLQARLGDTLLWKQKTEAAGQAYGDAMGWDPTAVDYGQLWSSLGAEG-----LLASLEVGAKAFTENHGTENNADATLLWWLGYARFTAVDYAGAEKAFASCVAKWPDYANSWFYMGLSRYHQTKYLEAGEAFAQNW----DADPNDLVASIDGNRETHTAIFQYVIGQLAAKQK----FVYAAKLSEALAGSQPDDWRFPNNAGLFWRN 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97194.23804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A518ER40_9BACT2.740e-9446.30Tetratricopeptide repeat protein n=1 Tax=Planctomy... [more]
A0A2E5X3L9_9BACT5.650e-3432.41Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..359
e-value: 1.5E-15
score: 59.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 39..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97194contigP-canaliculata_contig97194:6..1085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97194.23804.1mRNA_P-canaliculata_contig97194.23804.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97194 6..1085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97194.23804.1 ID=prot_P-canaliculata_contig97194.23804.1|Name=mRNA_P-canaliculata_contig97194.23804.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=360bp
IEAEGHESNDLDYVIGAARYALGKAEEAKGSPSAGGLYGEAAAYLADVTA
KAPDDYPDAWRMLAAAARWTGDMELAGSAITSAVKLEQSAATLTLAAKIR
VALGAAMIGDEGTKAEGMRYIEQGVKDAEAAAKALGDEKRAAPAIADVQL
QRAVGLLFLGRKEDAAKAYVDAIGWDPTQVDYAQLLGSLRSEKDGDKLFI
DTLEQAAAAFEKRWGSKLNSDATLHWYRGYAQHFAQDYAGSTESFEKSVA
KFPSFTNAYWYIGANHAWTEGADGTAAADAWMTYLELDKDGFLNTLRTDK
TATGYVGRVIGMLWNNSRGGANLETSAILAELNLESDPTNAKFWNNVGLM
SRDAGAWVKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf