prot_P-canaliculata_contig97116.23797.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97116.23797.1
Unique Nameprot_P-canaliculata_contig97116.23797.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length57
Homology
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BLAST of mRNA_P-canaliculata_contig97116.23797.1 vs. uniprot
Match: A0A6H5KDP6_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDP6_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.960e-15
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    1 DPKYPVDVSGGTVEGMETTCPFDDREDCNA----------TATSRCILPLGLVESGMDIGAPGAGCL 57
            DP+ PVDVSGG +EG+ TTCPFD REDC+           + TSRCILPLG+  + M +  PGA C+
Sbjct:  474 DPRLPVDVSGGAIEGVATTCPFDKREDCSCGSFEMKLQANSTTSRCILPLGITIAAMGVDTPGASCV 540
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97116.23797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDP6_9PHAE5.960e-1552.24Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97116contigP-canaliculata_contig97116:96..768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97116.23797.1mRNA_P-canaliculata_contig97116.23797.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97116 96..768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97116.23797.1 ID=prot_P-canaliculata_contig97116.23797.1|Name=mRNA_P-canaliculata_contig97116.23797.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=57bp
DPKYPVDVSGGTVEGMETTCPFDDREDCNATATSRCILPLGLVESGMDIG
APGAGCL
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