prot_P-canaliculata_contig9708.23792.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9708.23792.1
Unique Nameprot_P-canaliculata_contig9708.23792.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length464
Homology
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A6H5JCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH6_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 2.830e-126
Identity = 192/351 (54.70%), Postives = 239/351 (68.09%), Query Frame = 0
Query:  116 RSLQENLKSLRLDLSLGKHDPHSAGAPRREVHSLTSSALGAARKRPAAAR-----------------HSLYVRRKRPPSALCMPRHQRPQGCAPLLPI----ENQHAVVDHIVSQKMVRAELSDFKSDLPCVQNGTCPVPAFRCPKGHVWTSKGKPECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCTIIDKGIIRATLLGGLDPATAKRTEAELSSIGAMPTRRHFLPRK 445
            +SLQ+ L  +RLD SL   +P+ AGAP R +  L  S  G    + AAA                  +S Y RR+RP +A CMP++QRPQGC PLLP       Q  VVDH+  +      LS++KSDLPCVQ GTCPVP FRC KGHVW   G P CFYCP+CAD+R+T+     ++KRDL+ M+E+A  +GG CI++ Y GM  KI FRC +GHEWL+SPSN+ YK TWCP CA     ERK+L +A+MH+TARQFGG FLS EY GAAVKHEWRC RGH FW  PNNVRR+EGGRR ATFCK CT +D+ I++A +LGGLD   AK T  +L+++GAMPTRRHFL ++
Sbjct:  122 KSLQQRLDEMRLDFSLEDREPYVAGAPPR-IPPLPESPPGGTPSQAAAAAALAGSGTMPAKSGRQALYSNYRRRRRPLNASCMPKNQRPQGCGPLLPPIGTGGKQVVVVDHVAPELDKIRHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITT---RMKRKRDLEAMQEIARGKGGECIAEEYLGMDEKIAFRCGDGHEWLTSPSNLVYKNTWCPKCAALRSVERKKLTLADMHQTARQFGGVFLSPEYKGAAVKHEWRCKRGHTFWNTPNNVRRAEGGRRVATFCKICTSMDRRILKAAVLGGLDKDDAKSTLDQLNAVGAMPTRRHFLKKR 468          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: D7FQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ22_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 8.540e-121
Identity = 169/284 (59.51%), Postives = 210/284 (73.94%), Query Frame = 0
Query:  166 HSLYVRRKRPPSALCMPRHQRPQGCAPLLPI----ENQHAVVDHIVSQKMVRAELSDFKSDLPCVQNGTCPVPAFRCPKGHVWTSKGKPECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCTIIDKGIIRATLLGGLDPATAKRTEAELSSIGAMPTRRHFLPRK 445
            +S Y RR+RP +A CMP++QRPQGC PLLP       Q  VVDH+  +      LS++KSDLPCVQ GTCPVP FRC KGHVW   G P CFYCP+CAD+R+T+     ++KRDL+ M+E+A  +GG CI++ Y G+  KI FRC +GHEWL+SPSN+ YK TWCP CA     ERK+L +A+MH+TARQFGG FLS EY GAAVKHEWRC RGH FW  PNNVRR+EGGRR ATFCK CT +D+ I++A +LGGLD   AK T  +L+++GAMP RRHFL ++
Sbjct:   11 YSNYRRRRRPLNASCMPKNQRPQGCGPLLPPIGTGGKQVVVVDHVAPELDKIRHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITT---RMKRKRDLEAMQEIARGKGGECIAEEYLGIDEKIAFRCGDGHEWLTSPSNLVYKNTWCPKCAALRSVERKKLTLADMHQTARQFGGVFLSPEYKGAAVKHEWRCKRGHTFWNTPNNVRRAEGGRRVATFCKICTSMDRRILKAAVLGGLDKDDAKSTLDQLNAVGAMPIRRHFLKKR 291          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A836C7R5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R5_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.570e-60
Identity = 107/239 (44.77%), Postives = 136/239 (56.90%), Query Frame = 0
Query:  176 PSALCMPRHQRPQGCAPLLPIENQHAVVDHIVSQKMVRAELSDFKSDLPCVQNGTCPVPAFRCPKGHVWTS-KGKPECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCTIIDKGIIRATL 413
            PSALC P   RP GCAPLL    QH    H    +    +     + LPCV++G CP   F CP+GH W +  G P CF+CP C+ + V   G   R++  L  + ELA ARGG C+S  YRG+     F+CA+GH W +  +N+ Y  +WCP CA   R+   RL+ A+MH TA QFGGEFLS  Y GA  KH WRC  GH F Q PN +RR  GG+R   FC +C+   + I   TL
Sbjct:   70 PSALCRPTGTRPLGCAPLL----QH----HFPPPRTCTDDA--MMTPLPCVESGVCPFVRFECPRGHTWKAVAGAPACFFCPQCSAAEVR--GRRARRRLSLASLAELAAARGGECVSAEYRGLMEPHDFKCAKGHVWSALANNVVYCASWCPTCAKGQRAASNRLSAADMHATAAQFGGEFLSPTYHGADKKHLWRCSAGHTFKQTPNAIRRRVGGKRRPAFCPECSRAQRAISAVTL 296          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A1E4ZPU9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=PVC group bacterium (ex Bugula neritina AB1) TaxID=1868283 RepID=A0A1E4ZPU9_9BACT)

HSP 1 Score: 115 bits (287), Expect = 1.000e-23
Identity = 57/170 (33.53%), Postives = 95/170 (55.88%), Query Frame = 0
Query:  237 RCPKGHVWTSKGKPECF----YCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCT 402
            +C +GH+W+ +   + F    +C  C             QK  +  M ELAEA+GG C+S  Y   H K++++C EGH+W +SP+ I  + +WCP C   + ++++R ++ E+H+ A   GG+FLS EY+    KHEW C +GH +   P++++R        T+C  C+
Sbjct:   65 QCKEGHLWSIRY--DAFIRGSWCRKCYIES---------QKLTIGHMHELAEAKGGKCLSTNYVNAHTKLKWKCKEGHQWETSPNKIK-RGSWCPSCGRKSSNDKRRGSLKELHKLAESRGGKFLSTEYINVDTKHEWICKQGHVWSARPSSIKRG-------TWCPTCS 215          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A1D2RB87_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Altiarchaeales archaeon WOR_SM1_SCG TaxID=1849261 RepID=A0A1D2RB87_9ARCH)

HSP 1 Score: 107 bits (268), Expect = 1.090e-23
Identity = 59/174 (33.91%), Postives = 99/174 (56.90%), Query Frame = 0
Query:  236 FRCPKGHVWTSK------GKPECFYCPVCAD-SRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQA-PNNVRRSEGGRRTATFCKKC 401
            ++C  GHVW +K      G+    +CP CA  +R T           ++ M+E+AE+RGG C+S+ Y     K++++C EGH W ++P+++  + TWCP C G      ++L +A+M + A   GG+ LS+EY+ +  K +W+C +GH  W+A P++V+R        T+C  C
Sbjct:   34 WQCKAGHVWEAKPTNIVNGR----WCPHCAGVARFT-----------IEYMQEIAESRGGKCLSEKYGNTFTKLKWQCKEGHSWEATPNSVK-RGTWCPYCCGH-----EKLTIAQMQKIAESRGGKCLSEEYVNSLTKLKWQCKKGH-VWEAKPSSVKRG-------TWCPGC 178          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A7S4QL34_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QL34_9DINO)

HSP 1 Score: 110 bits (276), Expect = 1.170e-23
Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 0
Query:  227 QNGTCPVPAFRCPKGHVWTSK---GKPECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCT 402
            QN + P+  +RC +GH W +     K    +CP CA          R  +  +++ +E A ARGG+C+S  Y   H  + +RCAEGHEW +  S++ ++KTWCP CAG+ R     L++ +  R A   GG  LS  YL       WRC  GH  W A     +S G     ++C +C+
Sbjct:   22 QNSSAPL-RWRCAEGHDWRASLQNVKNGGSWCPRCAG---------RGWRLTIEIARETATARGGMCLSTHYEAAHKPLHWRCAEGHEWHAGLSSVRHQKTWCPRCAGNAR-----LSIDDARRIAEAHGGSCLSTHYLNRRSHLRWRCAEGHE-WSASMMGVKSAG-----SWCPRCS 179          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A7S4V335_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V335_9DINO)

HSP 1 Score: 110 bits (276), Expect = 2.170e-23
Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 0
Query:  236 FRCPKGHVWTS---KGKPECFYCPVCA--DSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCT-----IIDKGIIRATLLGGLDPAT 421
            +RC +GH W +     +    +CP CA   SR+T           +++ ++ A+ARGGLC+S  Y   H ++ +RCAEGH W +S ++I   +TWCP CAG+ R     L++    R A+  GG  LS  YL A     WRC  GH  W A     +S G     T+C  C+      + +GI+ A   G   P +
Sbjct:   98 WRCAEGHEWFAALHSIRSHQTWCPACAAEGSRLT-----------IEIARDAAQARGGLCLSSQYESSHTRLHWRCAEGHAWHASLNSIRSHETWCPYCAGTAR-----LSIDVAQRVAKARGGSCLSTHYLNARGHLRWRCAEGHE-WSASMTGVKSSG-----TWCPFCSGRKRETVIRGILEAIFAGHAFPTS 271          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A7S4QLW3_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QLW3_9DINO)

HSP 1 Score: 110 bits (276), Expect = 9.020e-23
Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 0
Query:  236 FRCPKGHVWTS---KGKPECFYCPVCA--DSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKKCT-----IIDKGIIRATLLGGLDPAT 421
            +RC +GH W +     +    +CP CA   SR+T           +++ ++ A+ARGGLC+S  Y   H ++ +RCAEGH W +S ++I   +TWCP CAG+ R     L++    R A+  GG  LS  YL A     WRC  GH  W A     +S G     T+C  C+      + +GI+ A   G   P +
Sbjct:  175 WRCAEGHEWFAALHSIRSHQTWCPACAAEGSRLT-----------IEIARDAAQARGGLCLSSQYESSHTRLHWRCAEGHAWHASLNSIRSHETWCPYCAGTAR-----LSIDVAQRVAKARGGSCLSTHYLNARGHLRWRCAEGHE-WSASMTGVKSSG-----TWCPFCSGRKRETVIRGILEAIFAGHAFPTS 348          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A6S7A7B5_9BURK (Uncharacterized protein n=2 Tax=Achromobacter kerstersii TaxID=1353890 RepID=A0A6S7A7B5_9BURK)

HSP 1 Score: 108 bits (271), Expect = 1.460e-22
Identity = 59/149 (39.60%), Postives = 77/149 (51.68%), Query Frame = 0
Query:  236 FRCPKGHVWTSKGKPEC--FYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAP 382
            FRC  GH W + G       +CP CA  R+  + G R     L+ ++  A  RGG C+S  Y G+  + RFRC EGHEWL++   I    +WC +CA       KRL +   H  AR+ GG+ LS  Y+    K  W CHRGH  W AP
Sbjct:  167 FRCGAGHEWNAPGADVLRRTWCPECA--RLRKVEGYRHPD-GLERLQRKAAERGGACLSDAYHGLGVRYRFRCTEGHEWLTTGGKILLG-SWCGVCANVN----KRLGIEAAHHAARERGGQCLSSSYVNTTKKLHWLCHRGHD-WYAP 306          
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Match: A0A2V5UAS9_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5UAS9_9BACT)

HSP 1 Score: 107 bits (268), Expect = 1.870e-22
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 0
Query:  236 FRCPKGHVWTS--KGKPECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHGKIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTARQFGGEFLSKEYLGAAVKHEWRCHRGHRFWQA-PNNVRR 387
            +RC +GH W +         +CP+C D R        ++   ++ M+ LAEA+GG+C+S  Y  +  ++R+RCAEGHEW S  S +     WCP C       +  L++ E+ +TA+  GGE L+  YL    K  WRC +GH  W+A  N++RR
Sbjct:  152 WRCTEGHEWEAVPSSVRRGAWCPICGDKRAAI-----KRAYTIEKMRTLAEAKGGVCLSANYSNVKSRLRWRCAEGHEWESQAS-VIIGGHWCPKCEQFRLGRKYALSLEEIQKTAKGRGGECLADNYLNTREKLIWRCAKGH-LWRANTNSIRR 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9708.23792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCH6_9PHAE2.830e-12654.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ22_ECTSI8.540e-12159.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7R5_9STRA2.570e-6044.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E4ZPU9_9BACT1.000e-2333.53Uncharacterized protein (Fragment) n=1 Tax=PVC gro... [more]
A0A1D2RB87_9ARCH1.090e-2333.91Uncharacterized protein n=1 Tax=Candidatus Altiarc... [more]
A0A7S4QL34_9DINO1.170e-2334.64Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S4V335_9DINO2.170e-2333.67Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4QLW3_9DINO9.020e-2333.67Hypothetical protein n=3 Tax=Alexandrium monilatum... [more]
A0A6S7A7B5_9BURK1.460e-2239.60Uncharacterized protein n=2 Tax=Achromobacter kers... [more]
A0A2V5UAS9_9BACT1.870e-2236.13Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..463
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9708contigP-canaliculata_contig9708:4639..11345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9708.23792.1mRNA_P-canaliculata_contig9708.23792.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9708 4386..11433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9708.23792.1 ID=prot_P-canaliculata_contig9708.23792.1|Name=mRNA_P-canaliculata_contig9708.23792.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=464bp
MLRQSGGLPDEHMSLIASAFVILGHQSHQRLSSSASASFIIFPQPIRAQT
PSSLTLGFGQASLYLDRIRSWEKPGALGTFTFTRVSRVLTVLTGQSGAVE
SEDVGNGSDGVRREARSLQENLKSLRLDLSLGKHDPHSAGAPRREVHSLT
SSALGAARKRPAAARHSLYVRRKRPPSALCMPRHQRPQGCAPLLPIENQH
AVVDHIVSQKMVRAELSDFKSDLPCVQNGTCPVPAFRCPKGHVWTSKGKP
ECFYCPVCADSRVTSLGGERRQKRDLDVMKELAEARGGLCISKTYRGMHG
KIRFRCAEGHEWLSSPSNIAYKKTWCPICAGSTRSERKRLNVAEMHRTAR
QFGGEFLSKEYLGAAVKHEWRCHRGHRFWQAPNNVRRSEGGRRTATFCKK
CTIIDKGIIRATLLGGLDPATAKRTEAELSSIGAMPTRRHFLPRKRKVHK
RRRATSKGVGRSA*
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