prot_P-canaliculata_contig9708.23791.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9708.23791.1
Unique Nameprot_P-canaliculata_contig9708.23791.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length112
Homology
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.660e-30
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS 111
            +QDPLE TTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS
Sbjct:  174 NQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS 230          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: UPI000719BA96 (superoxide dismutase [Mn], mitochondrial-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719BA96)

HSP 1 Score: 103 bits (257), Expect = 1.130e-25
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
Query:   50 VVGPVSQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            V+   +QDPLEGTTG VPLLGIDVWEHAYYLQYKNVRPDYVK+I+ VVNW DVQER   A
Sbjct:  115 VLACANQDPLEGTTGFVPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVVNWKDVQERFVTA 174          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A8K0P381_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P381_LADFU)

HSP 1 Score: 103 bits (257), Expect = 3.390e-25
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS 111
            +QDPLE TTGLVPL GIDVWEHAYYLQYKNVRPDYVK+IFKV NW DV+ERL  A S
Sbjct:  166 NQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKNIFKVANWKDVEERLKKAQS 222          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A672P4I5_SINGR (Superoxide dismutase n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672P4I5_SINGR)

HSP 1 Score: 102 bits (253), Expect = 6.290e-25
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+I+ VVNW +V ERL AA
Sbjct:  134 NQDPLQGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVVNWENVSERLQAA 188          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: UPI00096B0FD5 (superoxide dismutase [Mn] 1, mitochondrial-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B0FD5)

HSP 1 Score: 102 bits (253), Expect = 1.090e-24
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPLE TTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+IF ++NW DV ERL  A
Sbjct:  158 NQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIFDIINWKDVSERLAKA 212          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: UPI000258DF0A (superoxide dismutase [Mn], mitochondrial n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000258DF0A)

HSP 1 Score: 102 bits (253), Expect = 1.230e-24
Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+IF +VNW+DV  R  AA
Sbjct:  161 NQDPLQGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIFDIVNWSDVSARFKAA 215          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A673LQW0_9TELE (Superoxide dismutase n=11 Tax=Cyprinoidei TaxID=30727 RepID=A0A673LQW0_9TELE)

HSP 1 Score: 102 bits (253), Expect = 1.720e-24
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+I+ VVNW +V ERL AA
Sbjct:  177 NQDPLQGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVVNWENVSERLQAA 231          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A4W5JTU5_9TELE (Superoxide dismutase n=4 Tax=Salmoninae TaxID=504568 RepID=A0A4W5JTU5_9TELE)

HSP 1 Score: 101 bits (252), Expect = 1.980e-24
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+I+ V+NW +V ERL AA
Sbjct:  168 NQDPLQGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVINWENVSERLQAA 222          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A4W5JPW0_9TELE (Superoxide dismutase n=16 Tax=Salmonidae TaxID=8015 RepID=A0A4W5JPW0_9TELE)

HSP 1 Score: 101 bits (252), Expect = 2.070e-24
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+I+ V+NW +V ERL AA
Sbjct:  170 NQDPLQGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVINWENVSERLQAA 224          
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Match: A0A2P0ZKK6_CHACN (Superoxide dismutase n=2 Tax=Chanos chanos TaxID=29144 RepID=A0A2P0ZKK6_CHACN)

HSP 1 Score: 101 bits (252), Expect = 2.470e-24
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   55 SQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 109
            +QDPL+GTTGL+PLLGIDVWEHAYYLQYKNVRPDYVK+I+ VVNW +V ERL AA
Sbjct:  178 NQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVVNWENVSERLQAA 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9708.23791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ23_ECTSI1.660e-3096.49Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
UPI000719BA961.130e-2578.33superoxide dismutase [Mn], mitochondrial-like n=1 ... [more]
A0A8K0P381_LADFU3.390e-2582.46Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A672P4I5_SINGR6.290e-2583.64Superoxide dismutase n=2 Tax=Sinocyclocheilus grah... [more]
UPI00096B0FD51.090e-2481.82superoxide dismutase [Mn] 1, mitochondrial-like n=... [more]
UPI000258DF0A1.230e-2481.82superoxide dismutase [Mn], mitochondrial n=1 Tax=M... [more]
A0A673LQW0_9TELE1.720e-2483.64Superoxide dismutase n=11 Tax=Cyprinoidei TaxID=30... [more]
A0A4W5JTU5_9TELE1.980e-2481.82Superoxide dismutase n=4 Tax=Salmoninae TaxID=5045... [more]
A0A4W5JPW0_9TELE2.070e-2481.82Superoxide dismutase n=16 Tax=Salmonidae TaxID=801... [more]
A0A2P0ZKK6_CHACN2.470e-2481.82Superoxide dismutase n=2 Tax=Chanos chanos TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 62..105
e-value: 1.4E-18
score: 67.0
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D2.40.500.20coord: 28..111
e-value: 1.0E-23
score: 85.4
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 48..110
NoneNo IPR availablePANTHERPTHR11404SUPEROXIDE DISMUTASE 2coord: 50..109
NoneNo IPR availablePANTHERPTHR11404:SF34SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALcoord: 50..109
IPR019833Manganese/iron superoxide dismutase, binding sitePROSITEPS00088SOD_MNcoord: 72..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9708contigP-canaliculata_contig9708:2072..3268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9708.23791.1mRNA_P-canaliculata_contig9708.23791.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9708 2051..3770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9708.23791.1 ID=prot_P-canaliculata_contig9708.23791.1|Name=mRNA_P-canaliculata_contig9708.23791.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=112bp
MVGTTFPRRTHRNTHKIGLGLREPLGRELVGERFWTATKRRERGRTWPFV
VGPVSQDPLEGTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWA
DVQERLTAATS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019832Mn/Fe_SOD_C
IPR036314SOD_C_sf
IPR019833Mn/Fe_SOD_BS