prot_P-canaliculata_contig96855.23725.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96855.23725.1
Unique Nameprot_P-canaliculata_contig96855.23725.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length295
Homology
BLAST of mRNA_P-canaliculata_contig96855.23725.1 vs. uniprot
Match: A0A518EUD8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EUD8_9BACT)

HSP 1 Score: 243 bits (621), Expect = 9.700e-75
Identity = 134/291 (46.05%), Postives = 187/291 (64.26%), Query Frame = 0
Query:    6 QALLADHGGTHRLRPIVLTTVFGLDKSLASRIAKSLRENDVLKALHALPSPKGLQLLEHAFAEHGLSRSMLDAFSNAVDAYRGVLLEFSGGRTGLEASLAGWIPNLRAKAERDARRLVYRGLTTLDGTRTGTVYNSIYVQPSSEDSSKLDLFIVGVREDLRRLRPDEEIPLMVMAGHKSFGDWRDQRQSLDGMPMGRESEAHDDPRHMLIEPLCSDPVQELELVR-RGESTVVRISKASLDVNELATVAFGWKMSEYFSTGEEGSSDYHHISFTASVPAECMTIDLFIHED 295
            +AL +   G+  +RP+ LT   GL+KSLASR+ ++L E D L+AL  +P+P+GLQL+ HA  +   S ++L+  + A +AY  +L EFSGGRT LEA+LAGW+P  R +AERDARR V+RG+TTL GTR GTVYNSIY+ PSSED  +LD  +V +R+D+RRLR    + +M     +   DWR +R++L G       E  +DP   L+  LCS P+ +LE+ R R ++T +RI++ SLDVNE AT+  G +   +F       S Y  +   A  PAE +T DLFIH D
Sbjct:   30 EALHSAEAGS--IRPVQLTHELGLNKSLASRVIRALHEEDSLRALRGIPTPQGLQLIHHAARKAQASDAVLERLNRATEAYAELLSEFSGGRTDLEATLAGWLPEERERAERDARRSVFRGMTTLCGTRAGTVYNSIYLLPSSEDPERLDSLLVAIRQDVRRLRVGAPLLVMSFGPFRDDEDWRSKRRTLGGR------EVQEDPLSFLLPDLCSHPIPKLEVTRSRCDATEIRIAEDSLDVNEFATLGLGCRTLGHFERFATPESRYGCMPVRAGRPAEALTFDLFIHRD 312          
BLAST of mRNA_P-canaliculata_contig96855.23725.1 vs. uniprot
Match: A0A7D8UGG0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UGG0_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 3.550e-20
Identity = 67/279 (24.01%), Postives = 128/279 (45.88%), Query Frame = 0
Query:   20 PIVLTTVFGLDKSLASRIAKSLRENDVLKALHALPSPKGLQLLEHAFAEHGLSRSMLDAFSNAVDAYRGVLLEFSGGRTGLEASLAGWIPNLRAKAERDARRLVYRGLTTLDGTRTGTVYNSIYVQPSSEDSSKLDLFIVGVREDLRRLRPDEEIPLMVMAGHKSFGDWRDQRQSLDGMPMGRESEAHDDPRHMLIEPLCSDPVQELELVRRGESTVVRISKA-SLDVNELATVAFGWKMSEYF--STGEEGSSDYHHISFTASVPAECMTIDLFIHED 295
            P  +   +G++   A R+A +L+  D L  L  +P P+ L+ L  A  + G+   +L+  + A DA++ ++   +G R+GL+A +A W+P  RA+ + DA++  YRG+  L G    TV+ + ++ P      + D  I+     LR +RP   + L +  G           +S++G+ +       ++PR +LI+  C     EL     G++ V       ++ ++    +  G     +F  S   +       ++   SVP      D+ +H+D
Sbjct:   38 PKDVARTYGMNAVFAQRLAAALKRTDPLATLQHIPGPEPLRRLIEAARKKGVPEPLLEQATAANDAFQHIIRHVAGDRSGLDAIIAAWLPEARARIDNDAKQSAYRGMRQLKGIAANTVFFTCFIHPGGPGQPRHDQLILRGHMGLRCVRPGAPLTLSIRTGSTRPTPV----ESIEGVSV------RENPRSILIDEFCCGLPLELSCHEIGDAAVYTFDWGDAVGISSARDIVLGELTRAFFRPSCPPDSPRPRSGVTHGISVPTALYFFDMILHKD 306          
BLAST of mRNA_P-canaliculata_contig96855.23725.1 vs. uniprot
Match: A0A7L9BK03_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BK03_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 3.370e-12
Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 0
Query:   13 GGTHRLRPIVLTTVFGLDKSLASRIAKSLRENDVLKALHALPSPKGLQLLEHAFAEHGLSRSMLDAFSNAVDAYRGVLLEFSGGRTGLEASLAGWIPNLRAKAERDARRLVYRGLTTLDGTRTGTVYNSIYVQPSSEDSSKLDLFIVGVREDLRRLRP 170
            GGT  + P  L    G+DK LASR+ K+LRE D   +LHA+P P+ L+ +  A    G+   +    S A+  Y  ++   +G R+ L+A L+ W P+ R + E   ++ ++R ++ + G R    + ++ V     + +  DL  V     L R+RP
Sbjct:   78 GGT--VGPTALAGALGIDKVLASRLLKALRERDAASSLHAMPGPEPLRRVARACVARGVHEVVGLRASEAIARYEALIRGRAGDRSRLDAVLSAWAPSARREFELRRKQSLFRAMSEVRGVRAAFSHATVIVGRGQNEEA-FDLVWVNGYRSLCRVRP 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96855.23725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A518EUD8_9BACT9.700e-7546.05Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7D8UGG0_9BACT3.550e-2024.01Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A7L9BK03_9BACT3.370e-1230.38Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96855contigP-canaliculata_contig96855:94..978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96855.23725.1mRNA_P-canaliculata_contig96855.23725.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96855 94..978 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96855.23725.1 ID=prot_P-canaliculata_contig96855.23725.1|Name=mRNA_P-canaliculata_contig96855.23725.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=295bp
MGAALQALLADHGGTHRLRPIVLTTVFGLDKSLASRIAKSLRENDVLKAL
HALPSPKGLQLLEHAFAEHGLSRSMLDAFSNAVDAYRGVLLEFSGGRTGL
EASLAGWIPNLRAKAERDARRLVYRGLTTLDGTRTGTVYNSIYVQPSSED
SSKLDLFIVGVREDLRRLRPDEEIPLMVMAGHKSFGDWRDQRQSLDGMPM
GRESEAHDDPRHMLIEPLCSDPVQELELVRRGESTVVRISKASLDVNELA
TVAFGWKMSEYFSTGEEGSSDYHHISFTASVPAECMTIDLFIHED
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