prot_P-canaliculata_contig96638.23701.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96638.23701.1
Unique Nameprot_P-canaliculata_contig96638.23701.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length283
Homology
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BLAST of mRNA_P-canaliculata_contig96638.23701.1 vs. uniprot
Match: A0A517YZ71_9BACT (Uncharacterized protein n=1 Tax=Poriferisphaera corsica TaxID=2528020 RepID=A0A517YZ71_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 1.700e-15
Identity = 75/305 (24.59%), Postives = 140/305 (45.90%), Query Frame = 0 
Query:    7 QQVSGYLRGHVQSLMSGEESAIERSRESIMAPFGTAGATEPFVRQYARAISREIAPATQ-----ADS------------LQVRVNAMILAGRLPDSSALDPV-AVGLQDDDAGVRYLAAVALNGLIARDQVVDNQRGRVLELVNGQLEKETSTFAAAPMFKAMLDLG---AIDPLLQSLNVRVSRHVGRPNADLSPEADALRGIYTRLFSGEGT----AAEVKQLGRAAVRYQFLAARQLAAGNVSDTDSHIE---MIRVGQTTLTFVRERLNSTESIPPSVVAPITQERWDDVVEIANRWSTLL 283
            Q ++ +    V  L SG+E+ I ++R+ +      +G+++ FV+Q+   +  ++A   Q     +DS            L  R+NAMI+     + + ++PV A+GL D++ GVRY A+ A++ +    ++   ++  VL+L+   L +ET + A      A+ ++    A   LL  L  RV  H     A  SPE  AL+ ++T+L +        + ++K     A RY  LA  QL        ++  +   +IR+G   + F  E ++     P  +   ++   W  +    N W+ +L
Sbjct:   54 QAINAFNDYWVMQLASGDEAQIAKARKELKQIVSPSGSSKEFVKQFNHNLLAKLAQVIQKPNIPSDSSADEKAQIENNFLLTRINAMIVLVNT-EGAGIEPVLAIGLNDENPGVRYWASKAVSKIAQYKRLTKEEQAPVLKLLEQALGRETQSAALTEQLAALSNMNVGTARGILLNVLTARVGVHAKDIYASYSPEQKALQEMFTKLIADIARNGIDSDQIKSFTSVAFRYMTLATDQLLTDTAFTNETIADKRTIIRLGDRIMRFAHENIDPGARSPEKIDNALSLGDWAFIKTKVNDWNKIL 357
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96638.23701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A517YZ71_9BACT1.700e-1524.59Uncharacterized protein n=1 Tax=Poriferisphaera co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 53..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96638contigP-canaliculata_contig96638:193..1041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96638.23701.1mRNA_P-canaliculata_contig96638.23701.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96638 193..1041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96638.23701.1 ID=prot_P-canaliculata_contig96638.23701.1|Name=mRNA_P-canaliculata_contig96638.23701.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=283bp
WNDAQTQQVSGYLRGHVQSLMSGEESAIERSRESIMAPFGTAGATEPFVR
QYARAISREIAPATQADSLQVRVNAMILAGRLPDSSALDPVAVGLQDDDA
GVRYLAAVALNGLIARDQVVDNQRGRVLELVNGQLEKETSTFAAAPMFKA
MLDLGAIDPLLQSLNVRVSRHVGRPNADLSPEADALRGIYTRLFSGEGTA
AEVKQLGRAAVRYQFLAARQLAAGNVSDTDSHIEMIRVGQTTLTFVRERL
NSTESIPPSVVAPITQERWDDVVEIANRWSTLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold