prot_P-canaliculata_contig9615.23654.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9615.23654.1
Unique Nameprot_P-canaliculata_contig9615.23654.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length287
Homology
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 2.630e-143
Identity = 226/284 (79.58%), Postives = 240/284 (84.51%), Query Frame = 0
Query:    2 GGVELNLDLGKGRVFTLSGVPGRGPFRVSTTHPFLLDGLFVENLEEIQSQARRIQEVMSAAAEVHMCISGDGDEGEEDGGXXXKYDYDYGGEMELIMDDEQAKRSSPGAQEGGSVYEDTNISKMLGEKALVGGAGKGSASSSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFGNRAVTQ 285
            GGV L LDLGKG+VFTLSGVPGRGPF VST HPFLLDGLFVENLEEIQ+QARRIQEVMSAAAEV+MCISG+         XXX              DDE+AKRS P  QEGGSV+EDT+IS+ML  KA  G AG  S ++SANTRLMRDLSRLMRSDT+KLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMK+LEKEK LDHVRL+MKF DDYPFSPPFV IVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDF   +VTQ
Sbjct:   50 GGVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXX--XXXXXDDEKAKRSFP-TQEGGSVFEDTDISQMLSGKAKSG-AGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQ 329          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA)

HSP 1 Score: 245 bits (625), Expect = 8.840e-77
Identity = 138/276 (50.00%), Postives = 177/276 (64.13%), Query Frame = 0
Query:    5 ELNLDLGKGRVFTLSGVPGRGPFRVSTTHPFLLDGLFVENLEEIQSQARRIQEVMSAAAEVHMCISGDGDEGEEDGGXXXKYDYDYGGEMELIMDDEQAKRSSPGAQEGGSVYEDTNISKMLGEKALVGGAGKGSASSSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFGN 280
            E  L +     FT+   PG G F  ST   FL D L++ENLEE  S A  ++ V+  A  V+ CI+G   +   DG    +Y  D G  M+ + D E A +    A++  S  + T   +   E  L+GG    +    ANTRLMRDLSRLMR+DT  LGF+L+L +DD L  W + +FGF+DCPLAEDM KL+KE++L+H+ L MKF +DYP+SPPF R+VYPRF R TGYI+DGAFC ELLT QGWTPTNDIE+V+VQ+R  MV G ARIDF  
Sbjct:   18 EATLSIHGKHEFTIKKAPGSG-FTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMG--MDNVDDTELAAKY---AEKAVSANKATGTWEDRDEVPLIGGYAC-TYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNE 286          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK)

HSP 1 Score: 207 bits (527), Expect = 1.400e-62
Identity = 106/253 (41.90%), Postives = 161/253 (63.64%), Query Frame = 0
Query:   27 FRVSTTHPFLLDGLFVENLEEIQSQARRIQEVMSAAAEVHMCISGDGDEGEEDGGXXXKYDYDYGGEMELIMDDEQAKRSSPGAQEGGSVYEDTNISKMLGEKALVGGAGKGSASSSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDF 278
            F V T+  FLLD  F+EN+E+  S+A  ++EV+ A ++ +  I+   +EG+       +YDY           DE  K   P  ++  +  +  +++++          G G  +++ N RLM DL+++MR+DT  LGFSL+ KN+D++  W   LF F DC LA+D+ +L++ K +D V L ++F  DYPFSPPF+R+VYPRFK  TG++ I G+ CMELLTN GWTPTNDIES+++QIR++M+ G ARI+F
Sbjct:    8 FSVETSDEFLLDNFFLENIEDAVSEATAVEEVLCAISDTYKDITSGNEEGDNSANEDEEYDYGS---------DEDFKAEPPPTKDRATKDDWRDVAEI----------GGGHGATAGNKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKDIDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTNSGWTPTNDIESILIQIRSEMIAGDARIEF 241          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO)

HSP 1 Score: 147 bits (371), Expect = 2.600e-38
Identity = 80/182 (43.96%), Postives = 106/182 (58.24%), Query Frame = 0
Query:   97 IMDDEQAKRSSPGAQEGGSVYEDTNISKMLGEKALVGGAGKGSASSSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARID 277
            I DDE++  ++   Q+     ++     M  E+   GG            RL +DL R+M  DT + GFSL    +D++  W I LF F  D  LA+DMK L     +DH+ L M F D YPF PPFVR+V PRFKR TG+++ GA CMELLT  GW P NDIESV+V IR+ +VVG  R++
Sbjct:  119 IRDDEESSSTAAPKQKWRQPSQEAVSMSMRAEQETTGG----------KRRLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMKVLG----IDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWNPVNDIESVIVSIRSLLVVGDGRLE 286          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A448Z8A8_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8A8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.860e-36
Identity = 70/136 (51.47%), Postives = 95/136 (69.85%), Query Frame = 0
Query:  142 SSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 276
            S +  RL +DL R+M  DTE+ GFSL  + +D++ +W I LF F  D  LA+DM  +     +DH++L MKF + YPF PPFVR+V PRFKR TG++++GA CMELLT  GW P NDIESV+V +R+ +VVG  R+
Sbjct:  265 SGSKRRLAQDLYRIMNQDTEEAGFSLAPQTEDSMEKWTIKLFQFDPDSNLAKDMLVVG----IDHIKLEMKFPEQYPFEPPFVRVVNPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSVRSLLVVGDGRL 396          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A7S1ZF53_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF53_TRICV)

HSP 1 Score: 139 bits (350), Expect = 3.730e-36
Identity = 66/131 (50.38%), Postives = 93/131 (70.99%), Query Frame = 0
Query:  147 RLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 276
            RL  DL ++M +DT++ GF ++ K++D+L  W++ LF F  D  L++D+  L     +D V L M F D YPF PPFVR+V PRFKR TG++++GA CMELLT++GW P NDIESV+V IR+ +VVG  R+
Sbjct:   15 RLAADLYKIMMADTDEAGFKIEPKSEDSLDRWSVRLFAFDEDSNLSKDLAVLG----IDAVELEMSFPDQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWNPVNDIESVIVSIRSLLVVGDGRL 141          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS)

HSP 1 Score: 145 bits (365), Expect = 4.690e-36
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0
Query:  147 RLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 276
            RL  DL ++M +DT++ GFSL+  ++D++ +W I LFGF  D  LA+D+  +     +DHV L M F DDYPF PPFVR+V PRFKR TG++++GA CMELLT  GW P NDIESV+V IR+ MVVG  R+
Sbjct:  325 RLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLMVVG----MDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLMVVGDGRL 451          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: K0RZ81_THAOC (UBC core domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ81_THAOC)

HSP 1 Score: 143 bits (360), Expect = 8.840e-36
Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 0
Query:  147 RLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKAR----IDFGNRA 282
            RL  DL ++M +DT++ GFSL+  ++D++ +W INLFGF  D  LA+D+         D V L M F DDYPF PPFVR+V PRF+R TG+++ GA CMELLT+ GW P NDIESV+V IR+ MVVG  R    +D G  A
Sbjct:  250 RLASDLYKIMMADTKEAGFSLEPVDEDSMDKWRINLFGFDEDSNLAKDLMVCGT----DSVELQMSFPDDYPFKPPFVRVVKPRFQRQTGFVMSGALCMELLTSDGWNPVNDIESVIVSIRSLMVVGNGRLQAAVDMGQDA 386          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: B7G7I5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7I5_PHATC)

HSP 1 Score: 143 bits (361), Expect = 1.100e-35
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 0
Query:  142 SSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARID 277
            S    RL +DL R+M  DT K GFSL+   +D++  W I LF F  D  LA+DM  L     L+H+ L M F + YPF PPFVR+  PRFKR TG++++GA CMELLTN+GW P NDIESV+V +R+ +VVG  R++
Sbjct:  287 SGGKRRLAQDLYRIMNQDTNKAGFSLKPSKEDSMERWTIKLFKFDEDSNLAKDMLVLG----LEHIELEMSFPEQYPFEPPFVRVSRPRFKRQTGFVMNGALCMELLTNEGWNPINDIESVIVSVRSLLVVGDGRLE 419          
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Match: A0A7S4V873_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V873_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.020e-35
Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 0
Query:  147 RLMRDLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKKLEKEKRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 276
            RL  DL ++M +DT + GFSL+ K++D++ +W I LF F  D  LA+D+  L     +D + L M F + YPF PPFVR+V PRFKR TG++++GA CMELLT++GW P NDIESV+V IR+ +VVG  R+
Sbjct:   66 RLASDLYKVMMADTNEAGFSLEPKSEDSMDKWTIKLFKFDEDSNLAKDLLCLG----MDFIELEMSFPEQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWNPINDIESVIVSIRSLLVVGDGRL 192          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9615.23654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA1_ECTSI2.630e-14379.58UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBS4_9STRA8.840e-7750.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3XWH9_HETAK1.400e-6241.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5K8B1_FISSO2.600e-3843.96Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulif... [more]
A0A448Z8A8_9STRA1.860e-3651.47UBC core domain-containing protein n=1 Tax=Pseudo-... [more]
A0A7S1ZF53_TRICV3.730e-3650.38Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
B8C5U5_THAPS4.690e-3654.20UBC core domain-containing protein n=1 Tax=Thalass... [more]
K0RZ81_THAOC8.840e-3651.77UBC core domain-containing protein n=1 Tax=Thalass... [more]
B7G7I5_PHATC1.100e-3551.09Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4V873_9STRA3.020e-3551.15Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 147..266
e-value: 1.3E-9
score: 37.8
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 146..267
score: 14.438
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 138..285
e-value: 3.2E-36
score: 126.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 141..270
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 139..282
NoneNo IPR availablePANTHERPTHR24068:SF33UBIQUITIN-CONJUGATING ENZYME E2Q FAMILY MEMBER 1-RELATEDcoord: 139..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9615contigP-canaliculata_contig9615:6168..10066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9615.23654.1mRNA_P-canaliculata_contig9615.23654.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9615 6153..10066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9615.23654.1 ID=prot_P-canaliculata_contig9615.23654.1|Name=mRNA_P-canaliculata_contig9615.23654.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=287bp
MGGVELNLDLGKGRVFTLSGVPGRGPFRVSTTHPFLLDGLFVENLEEIQS
QARRIQEVMSAAAEVHMCISGDGDEGEEDGGEGEKYDYDYGGEMELIMDD
EQAKRSSPGAQEGGSVYEDTNISKMLGEKALVGGAGKGSASSSANTRLMR
DLSRLMRSDTEKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKKLEKE
KRLDHVRLVMKFNDDYPFSPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQ
GWTPTNDIESVVVQIRAQMVVGKARIDFGNRAVTQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD