prot_P-canaliculata_contig948.23493.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig948.23493.1
Unique Nameprot_P-canaliculata_contig948.23493.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length174
Homology
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BLAST of mRNA_P-canaliculata_contig948.23493.1 vs. uniprot
Match: D8LUC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC9_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 5.030e-62
Identity = 96/156 (61.54%), Postives = 117/156 (75.00%), Query Frame = 0 
Query:   18 PTVQEGLFVKNNWIFKREFFFKRDQPRNGQDVVDMRSNRLAKFGKSGEVGYWKVERRAPPGAKRNLKLALQDGFDVLVLDVPEQGDRKDLIVSYEIPVTRGRYHPSAIMFADEGKIFVAGAKEELTGAAAAARKNIGTFKVDLATLPPIVDRTFTL 173
            P VQ+G F K +W   R+FFFKRDQ +NG D +  R N+LA+F  SGEVGYWK+ RR  PGA +       +G D LVLD+PEQG R++LIVSYEIP++ GRYHPS+IMFA +G I+VA AKE+L G AAAARK IG+F VDL TL P+VDRTFTL
Sbjct:   15 PLVQDGSFAKADWRITRDFFFKRDQAKNGADFLTARENKLARFNNSGEVGYWKLVRRPIPGAPKRQSPLGNEGIDYLVLDIPEQGPRRNLIVSYEIPISNGRYHPSSIMFAQKGTIYVANAKEQLVGPAAAARKKIGSFSVDLPTLEPMVDRTFTL 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig948.23493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC9_ECTSI5.030e-6261.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig948contigP-canaliculata_contig948:1134..3269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig948.23493.1mRNA_P-canaliculata_contig948.23493.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig948 1066..3985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig948.23493.1 ID=prot_P-canaliculata_contig948.23493.1|Name=mRNA_P-canaliculata_contig948.23493.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=174bp
MLAMLADLTLARSIMPGPTVQEGLFVKNNWIFKREFFFKRDQPRNGQDVV
DMRSNRLAKFGKSGEVGYWKVERRAPPGAKRNLKLALQDGFDVLVLDVPE
QGDRKDLIVSYEIPVTRGRYHPSAIMFADEGKIFVAGAKEELTGAAAAAR
KNIGTFKVDLATLPPIVDRTFTL*
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