prot_P-canaliculata_contig9467.23485.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9467.23485.1
Unique Nameprot_P-canaliculata_contig9467.23485.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length122
Homology
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BLAST of mRNA_P-canaliculata_contig9467.23485.1 vs. uniprot
Match: A0A6H5L3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.230e-11
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   65 PSSTTAARLVVTHSS----------YMDGLIPLLDRFVVDPDAAPKIASVVPGRMYSCSGKHVL 118
            P   T ARLVVTHSS          YMDGLIPLLDRF+ DPDA   ++SV+PGR+Y   G+  L
Sbjct:   67 PERPTPARLVVTHSSECAPARAYPCYMDGLIPLLDRFIADPDAVNSVSSVIPGRIYVVKGRSEL 130
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BLAST of mRNA_P-canaliculata_contig9467.23485.1 vs. uniprot
Match: D7FP95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP95_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.020e-7
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   81 MDGLIPLLDRFVVDPDAAPKIASVVPGRMYSCSGKHVL 118
            MDGLIPLLDRF+ DPDA   ++SV+PGR+Y   G+  L
Sbjct:    1 MDGLIPLLDRFITDPDAVNSVSSVIPGRIYVVKGRSEL 38
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9467.23485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3X2_9PHAE1.230e-1154.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP95_ECTSI3.020e-760.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9467contigP-canaliculata_contig9467:10923..11947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9467.23485.1mRNA_P-canaliculata_contig9467.23485.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9467 10861..12109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9467.23485.1 ID=prot_P-canaliculata_contig9467.23485.1|Name=mRNA_P-canaliculata_contig9467.23485.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=122bp
MRTARADVRLLQKCSWMEVHQLRLAGCRGGRERSDAISSWAANMACQALC
GMPLETSSRLQTARPSSTTAARLVVTHSSYMDGLIPLLDRFVVDPDAAPK
IASVVPGRMYSCSGKHVLCML*
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