prot_P-canaliculata_contig93171.23327.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93171.23327.1
Unique Nameprot_P-canaliculata_contig93171.23327.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length366
Homology
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Match: UPI001CCD1051 (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCD1051)

HSP 1 Score: 75.1 bits (183), Expect = 3.340e-11
Identity = 95/375 (25.33%), Postives = 147/375 (39.20%), Query Frame = 0
Query:    1 DFLQKLDIDKSNVVEVNELTSGR----TRRFLGDMGVNTKTAIRIDETVKRVEAKAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDKTEPQIA-SFEERVTGLK-ESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPSENDLNSDGRLSLFELAQRIQERTDSKSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTTNKADAYQAYVDGLFKKYDRDKDSKLSQDELKKMR-RPLKGDADEDGFVTKFEATKYLTDSAAGKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRGSLSDL----DTNGDGQIQMSEFSTQWDEETLQSFRKSD 364
            + L+++D D++  +E +EL  GR     RR L   G+    +I ID+  K V+ K  E+RE                  A  D+  + SFG +   EP +       V G   E  F ++V+     IM  YD++++ +L+G E   +RW+  DP+++D N DGRLS+ EL  RI     S+S+                                                   G  +   D Y+ Y + L ++ DR+K+  L +DE  ++R  P   D + DG +T  E T+       G+ S                             P+G L D     D NGDGQI M E++T W    +  F   D
Sbjct:  108 EMLRRMDRDRNGKIEGDEL-EGRGGEFVRRILNGTGMENSKSINIDDASKAVQ-KVREQRE------------------AGVDSASM-SFGAASDAEPAVGFDAPPPVNGKSLEERFGKSVVDQVAGIMERYDKNKNHYLDGPEWSEVRWR-DDPTQDDANKDGRLSMEELCNRIVRSNGSRSR--------------------------------------GDDRGRDDRRSDEGDRSGD-DRYRQYAESLLRQNDRNKNGVLEKDEWGRLRGNPADYDKNGDGKITVEELTQRSESFGRGRSSRDRSDEAPKQETYRFLTATERL-------PKG-LPDWFMRNDLNGDGQIMMHEYTTSWSSSKVAEFNSYD 413          
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Match: A0A518CAB4_9BACT (EF hand n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CAB4_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 1.850e-10
Identity = 93/373 (24.93%), Postives = 144/373 (38.61%), Query Frame = 0
Query:    1 DFLQKLDIDKSNVVEVNELTSGR----TRRFLGDMGVNTKTAIRIDETVKRVEAKAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDKTEPQIASFEERVTGLKESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPSENDLNSDGRLSLFELAQRIQERTDSKSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTTNKADAYQAYVDGLFKKYDRDKDSKLSQDELKKMR-RPLKGDADEDGFVTKFEATKYLTDSAAGKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRGSLSDL----DTNGDGQIQMSEFSTQWDEETLQSFRKSD 364
            + L+++D D++  +E +EL  GR     RR L   G+    +I I++  K ++ KA E+RE      E  S     SFGA+ D      F        +  S EER        F + V+     IM  YD++++ +L+G E   +RW+  DP+++D N DGRLS+ EL QR+      +S                                                           D ++ Y + L ++ DR+K+  L +DE  ++R  P   D + DG +T  E T+       G+ S                             P+G L D     D + DGQI M EFST W    +  F + D
Sbjct:   96 EMLRRMDQDRNGKIEGSEL-EGRGGEFVRRMLNGTGMENSNSINIEDASKAIQ-KAREQREAG---VESASM----SFGASSDAKPAAGFDAPPPVNGK--SLEER--------FGKTVVDQVMGIMSRYDKNKNHYLDGPEWSEVRWR-DDPTQDDTNKDGRLSIEELCQRVVRSNGGRSSDRDDSRAENRE----------------------------------------SGDRGGDDRFRQYAESLLRQNDRNKNGVLEKDEWSRLRGNPADYDKNNDGKITVEELTQRSESYGRGRSSRSASSEQSKQETYRFLTATERL-------PKG-LPDWFLRNDQDADGQIMMHEFSTSWSSSKVSEFNQYD 400          
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Match: A0A7V8V2W6_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2W6_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 5.140e-9
Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = 0
Query:    2 FLQKLDIDKSNVVEVNELTSGR----TRRFLGDMGVNTKTAIRIDETVKRVEAKAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDKTEPQIASFEERVTGLKESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPSENDLNSDGRLSLFELAQRIQERTDSKS 177
             L++LD D++  +E NEL  GR     RR L   G+   ++I +D+  K V+ K  E+RE      E  S     SFGA  D      F        +  S EER        F + V+     IM  YD++++ +L+G E   +RW+  DP+++D + DGRLS+ EL QR+   + S+S
Sbjct:    1 MLRRLDQDRNGKIEGNEL-EGRGGDFVRRILNGTGMENSSSISVDDASKAVQ-KVREQREAG---VESGSM----SFGAESDAKPAAGFDAPPPVNGK--SLEER--------FGKTVVDQVMGIMSRYDKNKNHYLDGPEWSEVRWR-DDPTQDDKDKDGRLSIEELCQRVVRSSGSRS 160          
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Match: A0A2S8F0I4_9BACT (EF-hand domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F0I4_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 3.040e-8
Identity = 92/369 (24.93%), Postives = 143/369 (38.75%), Query Frame = 0
Query:    2 FLQKLDIDKSNVVEVNELTSGR----TRRFLGDMGVNTKTAIRIDETVKRVEAKAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDKTEPQIASFEERVTGLKESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPSENDLNSDGRLSLFELAQRIQERTDSKSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTTNKADA-YQAYVDGLFKKYDRDKDSKLSQDELKKMR-RPLKGDADEDGFVTKFEATKYLTDSAAGKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRGSLSDLDTNGDGQIQMSEFSTQWDEETLQSFRKSD 364
             L+++D D++  +E +EL  GR     RR L   G+    +I +++  K V+ KA EKRE      E  S     SFGAA D      F        +  S EER        + + ++     IM  YD++++ +L+G E   +RW+  DP+++D + DGRLS+ EL  R+      +S                                                    GS     DA ++ Y + L K+ DR+ +  L +DE  ++R  P   D + DG +T  E T+       G+ S                             P   LS+ D + DGQI M EF+T W    +  F + D
Sbjct:    1 MLRRMDQDRNGKIEGSEL-EGRGGEFVRRILTGTGMENSNSINVEDASKAVQ-KAREKREAG---VESASM----SFGAASDAKPAAGFDAPPPVNGK--SLEER--------YGKTIVDQVMGIMSRYDKNKNHYLDGPEWSEVRWR-DDPTQDDKDKDGRLSIEELCLRVVRSNGGQSS-----------------------------------------GRDEGRSEDRGSGDRGVDARFRLYAESLLKQNDRNGNGVLEKDEWSRLRGNPSDYDKNGDGKITVEELTQRSESFGQGRSSRSVSNEKPKQETYRFLTATERLPKGL---PDWFLSN-DQDADGQIMMHEFTTSWSTSKVSEFNEYD 304          
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Match: A0A354P604_9PLAN (Calcium sensor EFh n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354P604_9PLAN)

HSP 1 Score: 58.5 bits (140), Expect = 1.030e-5
Identity = 50/181 (27.62%), Postives = 82/181 (45.30%), Query Frame = 0
Query:    1 DFLQKLDIDKSNVVEVNELTSGRTR----RFLGDMGVN---TKTAIRIDETVKRVEAKAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDK--TEPQIASFEERVTGLKESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPSENDLNSDGRLSLFELAQRIQER 172
            +++++LD + +  +E NEL S R+R    RF  D G++   T +  R++E               AR+ F+ +      + G       +  F   +     P+  S + R    K        L  A+ ++  YDR+    L  DEI+  RW+ P P + DL+ DG+L+L ELAQR   R
Sbjct:   38 EWVRRLDANNNGYIEPNEL-SDRSRAFFDRFARDAGIDLNRTNSIARLEEA--------------ARRFFDSRKTDSSTAIGTPQVTSSIKGFEPDEGRFVVPEFGSPQVRFPYTKSH------LSSAQELLTRYDRNRDGVLTFDEIESSRWRGPSPQDCDLDRDGKLTLVELAQRYSRR 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93171.23327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
UPI001CCD10513.340e-1125.33hypothetical protein n=1 Tax=Bremerella volcania T... [more]
A0A518CAB4_9BACT1.850e-1024.93EF hand n=1 Tax=Bremerella volcania TaxID=2527984 ... [more]
A0A7V8V2W6_9BACT5.140e-932.78Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A2S8F0I4_9BACT3.040e-824.93EF-hand domain-containing protein n=2 Tax=Pirellul... [more]
A0A354P604_9PLAN1.030e-527.62Calcium sensor EFh n=1 Tax=Planctomycetaceae bacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 273..355
e-value: 2.7E-6
score: 29.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 246..349
e-value: 3.4E-7
score: 30.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 238..273
score: 11.194
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..29
score: 6.033
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 153..175
score: 5.475
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 323..358
score: 6.48
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 114..149
score: 5.42
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 153..165
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 127..139
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 336..348
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 7..19
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 112..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93171contigP-canaliculata_contig93171:3..1166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93171.23327.1mRNA_P-canaliculata_contig93171.23327.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93171 3..1166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93171.23327.1 ID=prot_P-canaliculata_contig93171.23327.1|Name=mRNA_P-canaliculata_contig93171.23327.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=366bp
DFLQKLDIDKSNVVEVNELTSGRTRRFLGDMGVNTKTAIRIDETVKRVEA
KAAEKREDARKDFEDKSRPKLNSFGAAPDNYGVDSFGVSDKTEPQIASFE
ERVTGLKESDFDEAVLKDAKSIMHTYDRDESKFLEGDEIKRIRWQAPDPS
ENDLNSDGRLSLFELAQRIQERTDSKSKKDSRSDRDRESRDDRGNSSSSS
DSKGSQSGRDSRESNSDSSSGTKSNTSSQGSTTNKADAYQAYVDGLFKKY
DRDKDSKLSQDELKKMRRPLKGDADEDGFVTKFEATKYLTDSAAGKRSSG
SSKSGSSSQSASSRSTDRRSSSSSSSKPRGSLSDLDTNGDGQIQMSEFST
QWDEETLQSFRKSDTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair