prot_P-canaliculata_contig106745.897.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig106745.897.1
Unique Nameprot_P-canaliculata_contig106745.897.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length152
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..150
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 74..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig106745contigP-canaliculata_contig106745:42..497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig106745.897.1mRNA_P-canaliculata_contig106745.897.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig106745 42..930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig106745.897.1 ID=prot_P-canaliculata_contig106745.897.1|Name=mRNA_P-canaliculata_contig106745.897.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=152bp
MLSFAYGGATDLGKWTGDKAPSSGDPNWELFKEAYLALGVLLIITCLPSL
LLSVGLMWVSVGSLVDYSYDDKQLWLGAMLGAVSPIVSFLMLRPYMALRS
TGKIAFQNRLTTITNVASTCVCALVVLLGGRLVAIISTQLIFTALARWLM
IR
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