mRNA_P-canaliculata_contig106745.897.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: UPI000994E8F3 (FAD-binding protein n=1 Tax=Alkalihalobacterium alkalinitrilicum TaxID=427920 RepID=UPI000994E8F3) HSP 1 Score: 75.9 bits (185), Expect = 3.120e-12 Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEIRIIK 231
QD+ PNCGSVF I+ L+RG V A FS KT NWI NRS+SP+ IL LI IHFVL +KC IE+ +K
Sbjct: 210 QDNVLPNCGSVFNTAYGPIIWLVRGLRVGKAHFSSKTWNWINNRSRSPIPILSLILIVRIIHFVLLKKCKIELIRVK 286
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: A0A6I5RA98_9CYAN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Leptolyngbya sp. SIO1E4 TaxID=2607768 RepID=A0A6I5RA98_9CYAN) HSP 1 Score: 71.6 bits (174), Expect = 9.910e-11 Identity = 33/77 (42.86%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEIRIIK 231
QD+S P+CGSVF+ F +I++ ++G V A FS+KT+NWI+N+S SP+ I +LI +H + R+K +EI +++
Sbjct: 214 QDYSAPSCGSVFKKFDYQILSKLKGYRVGKAKFSEKTNNWISNKSDSPINIKILILIAKLLHAIKRKKPVLEIIVVE 290
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: K9QZ60_NOSS7 (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9QZ60_NOSS7) HSP 1 Score: 70.9 bits (172), Expect = 1.650e-10 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEI 219
QDHS PNCGSVF+ I+ +++G ++ A FS KT NWI N+S+S L IL+LI +HF+ +K +EI
Sbjct: 203 QDHSAPNCGSVFKLSYYPIMKIMKGFSIGEATFSPKTANWIINKSQSSLPILILILIAKILHFLAFKKVKLEI 275
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: UPI00056B851A (FAD-binding protein n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI00056B851A) HSP 1 Score: 68.6 bits (166), Expect = 1.110e-9 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEIRII 228
QD++ PNCGSVF PKI+ I+G + A FSKKT NWI+N+S + + I LLI +H V ++K +EI ++
Sbjct: 209 QDNAIPNCGSVFSSADPKILESIKGLRIGEARFSKKTSNWISNKSSNYIYIYLLIVLAKILHLVKKKKAKLEIILV 284
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: K9F521_9CYAN (UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9F521_9CYAN) HSP 1 Score: 68.2 bits (165), Expect = 1.460e-9 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEIRIIK 231
QD+S PNCGSVF+ +I+ + G ++ + FSKKT NWI N+SKS L I LI +H L +K +E+ +I+
Sbjct: 206 QDYSAPNCGSVFKQADYRILRKLEGLSIGQSAFSKKTTNWILNKSKSSLPIRFLISMAQILHAFLGKKIELEVIVIE 282
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: A0A7X0H802_9BACT (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H802_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 1.240e-7 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEIRIIK 231
QDHS PNCGSVF+ I+ I+G + A +S KT NW+ + SP ++ LIR+ +H + R+ +E+ ++K
Sbjct: 232 QDHSAPNCGSVFKEAKMGILGRIQGTRLGSAQYSPKTINWLLSHGTSPRPMIWLIRYAKAVHLLFGRRAVLELIVVK 308
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: UPI0016827905 (FAD-binding protein n=1 Tax=Cyanobacteria TaxID=1117 RepID=UPI0016827905) HSP 1 Score: 61.2 bits (147), Expect = 3.780e-7 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVL--RRKCSIEIRII 228
QD+ GPNCGSVFR ++ ++G + A FS+KT NWI NRSKS I LI +H + R+K +EI ++
Sbjct: 216 QDNVGPNCGSVFRSANFSLLRKLQGFSFNQASFSRKTPNWILNRSKSSSSIKALIFLAGMLHLIKGDRKKLKLEIILV 293
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: A0A328FBH9_9DELT (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=A0A328FBH9_9DELT) HSP 1 Score: 59.7 bits (143), Expect = 1.160e-6 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 4 DHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITN-RSKSPLGILLLIRFTWFIHFVLRRKCSIEIRIIK 231
D S P+CGSVF P ++ L++G GA+FSKKT NWI+N + S IL LI+ IH + C EIR +K
Sbjct: 207 DPSKPSCGSVFCQANPIVMRLVKGMRCGGAIFSKKTPNWISNIDNASAKDILTLIKRVKCIHKLFFFSCKTEIRFLK 283
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: UPI0019C393D1 (FAD-binding protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI0019C393D1) HSP 1 Score: 59.7 bits (143), Expect = 1.240e-6 Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 1 QDHSGPNCGSVFRFFTPKIVALIRGRTVLGAVFSKKTDNWITNRSKSPLGILLLIRFTWFIHFVLRRKCSIEI 219
QDHS PNCGSVF+ + L RG V G FS KT NWI N+S+S I+ L+ +H + +K +E+
Sbjct: 219 QDHSAPNCGSVFK--KGYKLRLFRGLRVGGTSFSSKTSNWIVNKSESSFQIVALVTVIKGLHKIFGKKAVVEL 289
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Match: UPI000EF7977F (hypothetical protein n=1 Tax=Mucilaginibacter kameinonensis TaxID=452286 RepID=UPI000EF7977F) HSP 1 Score: 59.7 bits (143), Expect = 2.120e-6 Identity = 50/185 (27.03%), Postives = 84/185 (45.41%), Query Frame = 2
Query: 242 EKVWNSPTWTTLFTQIVAPLRFLLLTPLVLTRFSALELDVFYLLASTTILFSLFQNRFSNVFERMLSFAYGGATDLGKWTGDKAPSSGDPNWELFKEAYLALGVLLIITCLPSLLLSVGLMWVSVGSLV---DYSYDDKQLWLGAMLGAVSPIVSFLMLRPYMALRSTGKIAFQNRLTTITNVAS 787
+K W+SPT T + L L+ P++L+RF+A ++ ++YL ++ L L F F RM+++ GGA D+ + + + G NW+L + V+ +I +LL + L+ + SLV D WL + + + F L KIA R TIT++ S
Sbjct: 12 KKCWDSPTLNTWLSYSTKALSLFLVLPMLLSRFTAPQVALWYLFSTVISLQGLADMGFKVTFIRMIAYGAGGAKDIENYATSEVETHGVHNWDLISRIF---SVMRVIYKWVTLLFCIILLTLGTWSLVKPISLVSDPLDAWLAWGVIIIISCIKFYGTIYSNYLEGLNKIAIVRRWETITSIGS 193 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig106745.897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig106745.897.1 >prot_P-canaliculata_contig106745.897.1 ID=prot_P-canaliculata_contig106745.897.1|Name=mRNA_P-canaliculata_contig106745.897.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=152bp MLSFAYGGATDLGKWTGDKAPSSGDPNWELFKEAYLALGVLLIITCLPSLback to top mRNA from alignment at P-canaliculata_contig106745:42..930- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig106745.897.1 ID=mRNA_P-canaliculata_contig106745.897.1|Name=mRNA_P-canaliculata_contig106745.897.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=889bp|location=Sequence derived from alignment at P-canaliculata_contig106745:42..930- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig106745:42..930- >mRNA_P-canaliculata_contig106745.897.1 ID=mRNA_P-canaliculata_contig106745.897.1|Name=mRNA_P-canaliculata_contig106745.897.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at P-canaliculata_contig106745:42..930- (Pelvetia canaliculata dioecious)back to top |