prot_P-canaliculata_contig10535.730.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10535.730.1
Unique Nameprot_P-canaliculata_contig10535.730.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length589
Homology
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 5.500e-27
Identity = 84/246 (34.15%), Postives = 126/246 (51.22%), Query Frame = 0
Query:  353 DGLGHGYVSSFRPRLLNSDELNLIRAHLRSCRTNTADHRRGTTSCGSDVIRELAHKSGY-----IEVNQSEEGGNELTQLGCDNENDIFSLETFVEFCHWWTPVSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESSPGRLVLTYTSK----ASRDMSS-GRARKNGSEGCSVVVEHSYITVNPDRR--WKLHYGKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAFE 586
            +G G+G V++ + R +N +EL  +R  L++        ++       + +R+     GY     + +  S        + G +   ++ SLE FVEF  WW P+ TTLSL+ N+WAS NP RV GF+  + A+ QLL+ +R G FLLRFSES PG LV+++T      A RD S    A  +     S+ V+H  + V   RR  W     + G    Y SL DLV +   ++ LYP   K +AF+
Sbjct:   39 EGNGYGAVNTPQVRWMNEEELAFVRGVLKT--------KQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADAAFGRDGGNGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERER-GTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEV---RRGGWCYIEVEQGSKVPYPSLHDLVLACSSMEVLYPDVRKEDAFD 272          
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.080e-26
Identity = 117/384 (30.47%), Postives = 165/384 (42.97%), Query Frame = 0
Query:  249 ERANKIAYEAGLRDNRAKSVWVGATYKA-------NAGGGSVSGDDD-----------AYHRSVRWGYLSRALQLYLSNLQTIGGDAMLSVDSA-YSMDIRDNGKTFSSERCSSSEASWYARSDGLGHGYVSSFRPRLLNSDELNLIRAHLRSCRTNTADHRRGTTSCGSDVIRELAHKSGYIEVNQSEEGGNELTQLGCDNE------------------NDIFSLETFVEFCHWWTPVSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESSPGRLVLTYTS-------KASRDMSSGRARKNGSEGCSVVVEHSYITVNPDRR--WKLHYGKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAFE 586
            +RA   A  AGL D   + VWV AT  A       + GGGS +G                +  V W YL R L  +L    TI       VD   Y                   +AS      G G+G V++ + R +N +EL  +R  L++        ++       + +R+     GY         G EL  +G                       D+ SL+ FVEF  WW P+  TLSL+ N+WAS NP RV GF+  + A+ QLL+ +R G FLLRFSES PG LV+++T        +AS  ++S    +  S+  S+ V+H  + V   RR  W     + G    Y SL DLV +   +Q LYP   K +AF+
Sbjct:  595 KRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGGSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGW---------------RGDASSVGVGVGNGYGAVNTPQVRWMNEEELAFVRGVLKA--------KQEKVRLKQEKLRQQRASRGYA--------GTELVSIGSSGAADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERER-GTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQ--SMCVKHCLVEV---RRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFD 941          
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 6.550e-20
Identity = 64/165 (38.79%), Postives = 88/165 (53.33%), Query Frame = 0
Query:  421 GNELTQLGCDNENDIFSLETFVEFCHWWTPVSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESSPGRLVLTYTSKASRDMSSGRARKNGSEGCSVVVEHSYITVNPDRRWKLHYGKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAF 585
            G+E  ++      D  S+E F +F  WW P+ +TL +I N+WA   PVRV GFM  + AK +LL  +  G FLLRFSES  G LV+++T  +   +S GR         S+ V+HS + V    R  +   KGG    Y+SL D V    +L+ LYP   K  AF
Sbjct:  742 GDECPEVDGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAK-RLLMQRECGTFLLRFSESKMGALVISFTQPS---VSPGRR--------SLSVKHSLVEVKWGGRCCIQAEKGGM-RCYASLHDFVRRIPELKKLYPDIPKEEAF 893          
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 4.770e-19
Identity = 69/198 (34.85%), Postives = 96/198 (48.48%), Query Frame = 0
Query:  421 GNELTQLGCDNENDIFSLETFVEFCHWWTPVSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESSPGRLVLTYT---------SKASRDM-----SSGRAR-------------------KNGSEGCSVVVEHSYITVNPDRRWKLHYGKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAF 585
            G+E T++G D  +D  S+E F  F  WW P+  TL +I N+WA+  PVRV GFM  + +K +LL  +  G FLLRFSES  G LV+++T         S+ SR +      +GR                     ++G    S+ V+HS + V    R  +   KGG    Y SL D V    +L+ LYP   K  AF
Sbjct:  245 GDECTEVGGDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASK-RLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRR--SLSVKHSLVEVKWGGRCCIQAEKGGM-RCYGSLHDFVRQIPELKKLYPDIPKEEAF 438          
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.760e-16
Identity = 54/163 (33.13%), Postives = 72/163 (44.17%), Query Frame = 0
Query:  423 ELTQLGCDNENDIFSLETFVEFCHWWTPVSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESSPGRLVLTYTSKASRDMSSGRARKNGSEGCSVVVEHSYITVNPDRRWKLHYGKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAF 585
            + T+   D   D  S+ETF +F  WW P+  TL +I N+WA   PV V GF+G ++  E L + +  G FLLRFSES PG+LV+                       S    HS + V    R  +   + G    Y SL DLV     L+ LY        F
Sbjct:  913 DCTEYRLDGRYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENLRRAR--GAFLLRFSESHPGKLVI-----------------------SRAYHHSLVEVTEGGRCYMTVNQQGTRREYESLHDLVTQNGQLRHLYQDIPMEQVF 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10535.730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KJ41_9PHAE5.500e-2734.15SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI1.080e-2630.47SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI6.550e-2038.79SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT3_9PHAE4.770e-1934.85SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY6_ECTSI1.760e-1633.13SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 470..586
e-value: 1.2E-10
score: 43.3
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 471..586
IPR000980SH2 domainPFAMPF00017SH2coord: 477..544
e-value: 1.0E-6
score: 28.7
IPR000980SH2 domainPROSITEPS50001SH2coord: 469..567
score: 10.137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10535contigP-canaliculata_contig10535:2401..6277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10535.730.1mRNA_P-canaliculata_contig10535.730.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10535 1934..6415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10535.730.1 ID=prot_P-canaliculata_contig10535.730.1|Name=mRNA_P-canaliculata_contig10535.730.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=589bp
MFYANCVQPDTLDECPPPSKQESRRYTEGVDNGSNFRHRIGLALGMPRES
VPSAQELWDFLVTSTQEKMSAQERMSPQGKAKETPTKILLLLKGVDALYE
GGGIEARKSLFTFLDELCRISTNFKLVLTCEKQLLENANAHFRSTKEQVH
KVLPLSKENSAKLLMHLLPVGSELRYADVSSQPSPNYKEAVERIQNLSLM
ETVNGHPGILHLLGPDLLYPFQNNPSYEKMAITYRAQFEKGRIKPFSLER
ANKIAYEAGLRDNRAKSVWVGATYKANAGGGSVSGDDDAYHRSVRWGYLS
RALQLYLSNLQTIGGDAMLSVDSAYSMDIRDNGKTFSSERCSSSEASWYA
RSDGLGHGYVSSFRPRLLNSDELNLIRAHLRSCRTNTADHRRGTTSCGSD
VIRELAHKSGYIEVNQSEEGGNELTQLGCDNENDIFSLETFVEFCHWWTP
VSTTLSLIPNEWASLNPVRVQGFMGIMQAKEQLLKTKRPGVFLLRFSESS
PGRLVLTYTSKASRDMSSGRARKNGSEGCSVVVEHSYITVNPDRRWKLHY
GKGGDGNSYSSLRDLVNSKVDLQTLYPSFAKGNAFETS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR000980SH2