prot_P-canaliculata_contig10530.724.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10530.724.1
Unique Nameprot_P-canaliculata_contig10530.724.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length103
Homology
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.110e-31
Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    7 LKEHYDA-------------YHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKVQVTEMGED 94
            +KEHYDA              HKDLE+RPL LE+CL+TFT QED+KE YCSRCK FRNA KKMDVWRLPPIL IQLKRFQYT YS RKL+  V     G D
Sbjct: 1566 IKEHYDASEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLD 1666          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.110e-31
Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    7 LKEHYD-------------AYHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKVQVTEMGED 94
            +KEHYD             A HKDLE+RPL LE+CL+TFT QED+KE YCSRCK FRNA KKMDVWRLPPIL IQLKRFQYT YS RKL+  V     G D
Sbjct: 1737 IKEHYDPSEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLD 1837          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A7S2SQ59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ59_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.090e-21
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   16 KDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            ++L  RPLRLE C++TFT++E + E YCS+CK  RNA  K D WRLPPILV+ LKRFQ+T YS RKL   V
Sbjct:   28 QNLGDRPLRLERCIDTFTKEEKISEAYCSKCKEHRNASLKTDFWRLPPILVVHLKRFQFTSYSRRKLHNLV 98          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A7S2SQ88_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ88_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.480e-20
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   16 KDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            ++L  RPLRLE C++TFT++E + E YCS+CK  RNA  K D WRLPPILV+ LKRFQ+T YS RKL   V
Sbjct: 1309 QNLGDRPLRLERCIDTFTKEEKISEAYCSKCKEHRNASLKTDFWRLPPILVVHLKRFQFTSYSRRKLHNLV 1379          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.910e-19
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   19 ESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKVQVTEMGED 94
            ES+P+ L+ CLETFT +E + E YCSRCK  R    +M +WRLPP+LVIQLKRFQYT YS RKL+  V     G D
Sbjct: 1634 ESQPMSLQRCLETFTAEETIPEGYCSRCKELRETNMRMGLWRLPPVLVIQLKRFQYTAYSRRKLRNLVDFPIRGLD 1709          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A7S2BSF3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSF3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.090e-17
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    5 PGLKEHYDAYHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            P +K  Y   H D    PL LE+C++TFTQ+E + E +CS+CK  R A  K + WRLPPILV+ LKRFQ+T YS RKL   V
Sbjct:   12 PNVKTDYR--HTD---EPLTLEKCIDTFTQEEKISEAFCSKCKELRTASLKTEFWRLPPILVVHLKRFQFTSYSRRKLHNLV 88          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A0P1APS4_PLAHL (Ubiquitinspecific protease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APS4_PLAHL)

HSP 1 Score: 84.7 bits (208), Expect = 1.300e-17
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query:   15 HKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            H+  +++PL L  CLE FT +E + E YC RCK  R A KKMD+WRLPP+LVI LKRF +T  S RKL   V
Sbjct:   10 HQREDNQPLNLTHCLEIFTAKETIPEAYCGRCKTLRPATKKMDIWRLPPLLVIHLKRFCFTQVSRRKLHHLV 81          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A7S2BU41_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BU41_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.180e-17
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    5 PGLKEHYDAYHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            P +K  Y   H D    PL LE+C++TFTQ+E + E +CS+CK  R A  K + WRLPPILV+ LKRFQ+T YS RKL   V
Sbjct:  411 PNVKTDYR--HTD---EPLTLEKCIDTFTQEEKISEAFCSKCKELRTASLKTEFWRLPPILVVHLKRFQFTSYSRRKLHNLV 487          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: A0A484E318_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E318_BRELC)

HSP 1 Score: 85.9 bits (211), Expect = 2.260e-17
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    7 LKEHYDAY-------------HKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKV 86
            LKE YD+              H  L+++PL L  C+E FT +E + E YC RCK  R A KKMD+WRLPP+LVI LKRF +T  + RKL   V
Sbjct: 1377 LKEEYDSIQASKLDLDASVQEHNRLDNQPLNLSHCMEIFTAKETIPEAYCGRCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQVARRKLHHLV 1469          
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Match: F0VYX5_9STRA (Ubiquitinspecific protease putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYX5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.260e-17
Identity = 46/92 (50.00%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    4 TPGLKEHYDA-------------YHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFRNAWKKMDVWRLPPILVIQLKRFQYTDYSGRKL 82
            T  LKE YD              +++  +  PL L++CL  FT QE + E YC RCKA R A K MD WRLPPILVI LKRF YT  S RKL
Sbjct: 1483 TASLKEEYDPLEASTMITDASIEHNRQKDQGPLTLDQCLNIFTAQEHINEAYCGRCKALRPANKTMDFWRLPPILVIHLKRFCYTQVSRRKL 1574          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10530.724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR49_ECTSI1.110e-3164.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLB3_9PHAE1.110e-3164.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQ59_9STRA6.090e-2160.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SQ88_9STRA4.480e-2060.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YVN1_9STRA2.910e-1957.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2BSF3_9STRA1.090e-1752.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0P1APS4_PLAHL1.300e-1755.56Ubiquitinspecific protease n=1 Tax=Plasmopara hals... [more]
A0A7S2BU41_9STRA2.180e-1752.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A484E318_BRELC2.260e-1747.31Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
F0VYX5_9STRA2.260e-1750.00Ubiquitinspecific protease putative n=1 Tax=Albugo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 35..90
e-value: 4.4E-7
score: 29.7
NoneNo IPR availableGENE3D3.90.70.10coord: 3..100
e-value: 5.8E-22
score: 80.2
NoneNo IPR availablePANTHERPTHR21646:SF24FI20021P1coord: 17..97
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 17..97
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..103
score: 10.377
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 21..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10530contigP-canaliculata_contig10530:6315..8621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10530.724.1mRNA_P-canaliculata_contig10530.724.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10530 6315..8621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10530.724.1 ID=prot_P-canaliculata_contig10530.724.1|Name=mRNA_P-canaliculata_contig10530.724.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=103bp
TERTPGLKEHYDAYHKDLESRPLRLEECLETFTQQEDVKEWYCSRCKAFR
NAWKKMDVWRLPPILVIQLKRFQYTDYSGRKLQRKVQVTEMGEDELGSSS
SSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf