prot_P-canaliculata_contig10489.664.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10489.664.1
Unique Nameprot_P-canaliculata_contig10489.664.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length422
Homology
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 2.070e-115
Identity = 229/437 (52.40%), Postives = 272/437 (62.24%), Query Frame = 0
Query:    1 GTHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERIMDPDAGVRRRVLPSDSSREKMRSREDMQAFDGILG------------RDGPSTVSDNCIRNNEREPSKSIASRSLRLDETNEAEDDGDNGGGRERVCGER-IEGWAGVSTLKSNKHGVQTSRPIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASNDSDQTGTQADESPGSKADASSGTHLLFSRPVFDAMQCRPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLPLPPAVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEHQQQQPREPEM--VYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPSWTMFD 422
            G  + DY+AA KSQRLLLGVP PAL+H F QHL+RGE++MDPDAGVR RV     S++ +   ED    DG +G             D PS  +D      +                                +  E  +E  A  S   + +  V+ +  IVPRMFDLERQLLCFVLHE++FLPALQ SL+HR P                    PG  AD SS   LL            PVNERLETLGDAWLN+YAGFV+FQDKPV+ EEGMMTLLRKNVVSNARL+KCADGRGLREF+YPPR+I G+PF+MW PSLLPLPP V+ S+K IADVVEALLGAALVAGGNRSAA++MEWLGL    A+           + P  P +  VYV TKPSARLMG++R LE+ L YTF++PWLC+QAITHPSWT+ D
Sbjct:  958 GVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSRVKVKRPSKKSL---EDDGQVDGAMGVTEKGEDNPEERGDAPSPAADAAGTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVVEAPVERPAASSESAAGEMAVEAA--IVPRMFDLERQLLCFVLHESLFLPALQTSLYHRNP--------------------PG--ADKSSNDKLL------------PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGL----AAASXXXXXXXXGEDPAAPPLPEVYVATKPSARLMGNIRLLEKRLGYTFRYPWLCMQAITHPSWTIND 1351          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 371 bits (952), Expect = 5.800e-115
Identity = 233/470 (49.57%), Postives = 253/470 (53.83%), Query Frame = 0
Query:    1 GTHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERIMDPDAGVRRRVLPSDSSREKMRSREDMQAFDGILGRDGPSTVSDNCIRNNEREPSKSIASRS-------LRLDETNEAEDDGDNGGGRERVCGERIEGWAGVSTLKSNKHGVQTSRP-----------------------IVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASNDSDQTGTQADESPGSKADASS-GTHLLF---------------------------------------------------SRPVFDA--------------------------------------------------------------------------MQC---RPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLP 311
            G HEHDY+AACKSQRLLLGVPVPALRH FVQHL+RGER+MDPDAGVRRRVL S  +  +               + G S   D      E  P  +   R          +DETNEAEDD D+GGGR+R  GE IEGWAGVSTLKSNKHGVQT+R                        IVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNAS+DSDQTGT+ADESPG+KADASS G  L+                                                    S P  D+                                                                          + C   RP+NERLETLGDAWLNFYAGFVIFQDKPVMREEGMMT LRKN+VSNARL+KCADGRGLREFIYPPRTI GQPFEMW PSLLP
Sbjct:  664 GIHEHDYKAACKSQRLLLGVPVPALRHSFVQHLMRGERVMDPDAGVRRRVLLSQRAGSE---------------KPGASIPEDEATNKPEGAPDDNGVYREGYGVHTVHEVDETNEAEDDRDDGGGRKRAGGESIEGWAGVSTLKSNKHGVQTTRAVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASDDSDQTGTKADESPGTKADASSSGIQLILDDASIGDGSATSMTSLPPAQTSGGVIGASLESDPTRWDRNLSADATEAPPASTPADDSTVPSGAEAINWPPNGVWNAPGGGVGIAYGPGRTMTSDHGGDLGRGEEAKVEIAAVGAVQWQGGSEGSVADTLSLLDCSLRRPINERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSLLP 1118          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.310e-61
Identity = 113/145 (77.93%), Postives = 129/145 (88.97%), Query Frame = 0
Query:  223 VFDAMQCRPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLPLPPAVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEH 367
            + D    RPVNERLETLGDAWLN+YAGFV   DKPV+ EEGMMTLLRKNVVSNARL+KCADGRGLREF+YPPR+I G+PF+MW PSLLPLPP V+ S+K IADVVEALLGAALVAGGNRSAA++MEWLGLPTLE+SNDP++  E+
Sbjct: 1803 LLDCSLRRPVNERLETLGDAWLNYYAGFV---DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESSNDPEKAKEY 1944          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.230e-28
Identity = 85/239 (35.56%), Postives = 125/239 (52.30%), Query Frame = 0
Query:  216 HLLFSRPVFDAMQCRPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPF-EMWLPSLLPLP-PAVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDE-------PLEHQ----------------------QQQPREP----EMVYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPSWT 419
            HL  +    +    RP NERLETLGDAWL  Y    I Q +P+++EEG+++  R N+V NARL K A    L  +++P R++ G+PF E W+P+L+  P P  +V  K  AD VEA+LG  L+ GG  +   ++ ++GLPTL     P+         LE                        Q Q   P    ++ ++ T+P+A  + S+  LE+ L YTF + WL +QA+TH S T
Sbjct:   45 HLPVNVESVEVAVRRPANERLETLGDAWLKAYMCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPALMAPPSPGPQVGWKTPADCVEAILGCCLILGGEAAPQAMLRFVGLPTLSNYVTPETGAAISALTLEQAVAKAVTTGLRGWGLGGGGELVAQLQSLPPGSFFDVEFIGTEPAAATVQSLHSLERSLGYTFTNKWLPLQAVTHASST 283          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A4D9CT29_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT29_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.980e-20
Identity = 77/233 (33.05%), Postives = 116/233 (49.79%), Query Frame = 0
Query:  229 CRPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLL-PLPP-AVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTL--------EASNDPD-------------EPLEHQQQQP-------------------REPEMVY--VTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPS 417
            C+P  ERLE LGD +L +    V+ + +P +  E ++   R N+  N RL++ A  RGL   I     +  +P+  W PSL+ PL   A EV+ K+IADVVEAL+GA L+ GG R+A   + WLGLP +        + S+ P               P + ++ Q                      P+ ++     KP+  L+  V +LE+ L YTF++ WL +QA+THPS
Sbjct: 1286 CKPDYERLEVLGDIYLKWVMTCVVLRKEPYLLRESLLHDFRCNLTCNRRLVRAALQRGLEGHIVLRAKVVNEPYRHWAPSLMAPLAASASEVNVKVIADVVEALIGAYLLDGGPRAADAFLRWLGLPVMCERDVCQQQRSSMPGLSDAPAAFFTAGPPPRDREKLQKAYWPLLQRCCQCWKEDNLANTPQNIHPKAVPKPATDLVLKVTKLEKFLGYTFRNKWLALQALTHPS 1518          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: T1K8D9_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1K8D9_TETUR)

HSP 1 Score: 84.7 bits (208), Expect = 9.100e-14
Identity = 63/199 (31.66%), Postives = 101/199 (50.75%), Query Frame = 0
Query:  234 ERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLPLPPAV----------EVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEHQQQQPREPEMVYVTTKP---SARLMGSVRRLEQELSYTFKHPWLCIQAITHPSWT 419
            ERLE +GD++L +    ++F     + E   +T L+  +VSN  L+     +GL ++I           + +LP L  LPP            E+S K +AD++EALLGA L+  G ++A   + W+G+P   + N  D  +      P   + V +       +A   G++ +LEQ+L YTFK   L I+A+THPSW+
Sbjct: 1251 ERLEIIGDSFLKYIVSALLFLQLNDLNE-ARITYLKMTLVSNFYLLHLGRSKGLAQYIND---------KTFLPRLNWLPPFYSSANRNFTEQEISDKSVADMMEALLGAHLICLGEKAAISFLSWIGMPLFTSFNF-DSLMNDNSYLPSYHDTVPIENPAEIQAAWRCGNLSKLEQKLGYTFKRKDLLIEALTHPSWS 1438          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: W4FGQ3_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGQ3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.790e-13
Identity = 58/200 (29.00%), Postives = 96/200 (48.00%), Query Frame = 0
Query:  230 RPVNERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLP-LPPAVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDE-----------PLEHQQQQPREPEMVYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPS 417
            +P  ERLE LGD +L   + + ++Q++P ++ EG +++LR +++ N RL K +  + L  ++  P     +PF  W+PS +   P AV    K IADV+E+  GA +   G  +    +EW G    E     +            P +   + PR+     +T      +   +  L+  L Y FK   L ++AITHPS
Sbjct: 1055 KPAYERLEMLGDCFLKLESTWWLYQNRPDVKSEGTLSMLRGDMIRNDRLCKLSMDKMLHHYMIYPADFEQRPFRTWIPSCMGRTPDAVIAHLKWIADVLESTCGAYIEGAGEVAGRAFLEWTGCSVCETPQVYNRTYFPHCLPQPVPAQVDPETPRDLATWDLTHLGYDDIPERMYLLQTSLKYNFKDKRLLLEAITHPS 1254          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: UPI001D04028C (uncharacterized protein n=2 Tax=Morchella sect. Distantes TaxID=1051054 RepID=UPI001D04028C)

HSP 1 Score: 80.1 bits (196), Expect = 2.750e-12
Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 0
Query:  234 ERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFI---------YPPRTIRGQPFEMWLPSLLPLPPAVEV-SQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEHQQQQPREPEMVYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPS 417
            +RLE LGD+ L F     +  + P   E G+++  +  VVSNA L K A G+GL +++         + PR I     E    +    PP+  V S+K++ADVVEAL+GAA V GG   A   +++ GL  +       EPL     Q R   +     K S      +R L+  L Y FKH  L ++A+THPS
Sbjct: 1031 QRLEFLGDSILKFLVSINLLDEHPSWHE-GVLSTKKAKVVSNATLAKAAQGKGLAQWVISEEFTGAKWSPRYINSANEECAKRTPDDSPPSDRVLSRKVLADVVEALIGAAYVEGGYDQALRCIDFFGLGVVL------EPL-----QSRVSSLFRKAGKTSPVKHAYLRGLQDLLGYKFKHQSLLLEAVTHPS 1212          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A3N4KTJ5_9PEZI (Uncharacterized protein n=1 Tax=Morchella conica CCBAS932 TaxID=1392247 RepID=A0A3N4KTJ5_9PEZI)

HSP 1 Score: 76.3 bits (186), Expect = 4.460e-11
Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 0
Query:  234 ERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFI---------YPPRTIRGQPFEMWLPSLLPLPPAVE-VSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEHQQQQPREPEMVYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPS 417
            +RLE LGD+ L F     +  + P   E G++++ +  ++SN+ L K A G+GL ++I         + P+ I     E         PP+V+ +S+K++ADVVEAL+GAA V GG   A   ++  GL          +PL     Q R   + +   K     +  ++ L+  L Y FKH  L ++A+THPS
Sbjct:  725 QRLEFLGDSVLKFLVSINLLDEHPSWHE-GVLSMKKAKIISNSTLAKAAQGKGLAQWIISEEFTGAKWSPKYIHSANEECAKRMPNDCPPSVKTLSRKVLADVVEALIGAAYVEGGYDQALRCIDVFGLDLAL------KPL-----QSRASSLFHKAGKAPPVKLTYLKGLQDLLGYQFKHQSLLLEAVTHPS 906          
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Match: A0A371H3C5_MUCPR (Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H3C5_MUCPR)

HSP 1 Score: 75.9 bits (185), Expect = 6.100e-11
Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 0
Query:  234 ERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQPFEMWLPSLLPLPPAV----------------------EVSQKIIADVVEALLGAALVAGGNRSAAFLMEWLGLPTLEASNDPDEPLEHQQQQPREPEMVYVTTKPSARLMGSVRRLEQELSYTFKHPWLCIQAITHPSWTM 420
            E LETLGD++L + A   +FQ  P    EG++++ R+ ++SNA L K     GL  FI      R +PF+   P+   +P                         ++ +KI+ADVVEAL+GA L  GG  SA   M+W+G+  +  +  P E   H   QP +  +V+V+             LE +L YTF+   L ++A+TH S+ +
Sbjct:  936 ESLETLGDSFLKYAASQQLFQTYP-NHHEGLLSVKREKIISNASLCKLGCSSGLPGFI------RNEPFD---PNTWTIPGDKSGNFKLEELDTKGGKFYVSGKRKLKRKIVADVVEALIGAFLSTGGENSALLFMDWVGI-KVSFNIIPYE--RHFDIQPEK--LVHVSL------------LESQLKYTFRDRSLLVEALTHGSYML 1117          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10489.664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW2_ECTSI2.070e-11552.40Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A2S1PRV6_FUCSE5.800e-11549.57Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
A0A6H5KQM7_9PHAE1.310e-6177.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3Y3_9STRA9.230e-2835.56Ribonuclease III domain-containing protein n=1 Tax... [more]
A0A4D9CT29_9STRA1.980e-2033.05Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
T1K8D9_TETUR9.100e-1431.66Uncharacterized protein n=1 Tax=Tetranychus urtica... [more]
W4FGQ3_9STRA2.790e-1329.00Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
UPI001D04028C2.750e-1234.54uncharacterized protein n=2 Tax=Morchella sect. Di... [more]
A0A3N4KTJ5_9PEZI4.460e-1131.44Uncharacterized protein n=1 Tax=Morchella conica C... [more]
A0A371H3C5_MUCPR6.100e-1131.58Endoribonuclease Dicer-like 2 (Fragment) n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 221..360
e-value: 6.0E-4
score: 25.8
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 234..339
e-value: 1.8E-13
score: 51.0
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 234..339
score: 16.311
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 214..355
e-value: 2.7E-20
score: 74.6
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 232..356
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 232..418
NoneNo IPR availablePANTHERPTHR14950:SF37ENDORIBONUCLEASE DICERcoord: 232..418

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10489contigP-canaliculata_contig10489:1505..10728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10489.664.1mRNA_P-canaliculata_contig10489.664.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10489 1505..10728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10489.664.1 ID=prot_P-canaliculata_contig10489.664.1|Name=mRNA_P-canaliculata_contig10489.664.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=422bp
GTHEHDYEAACKSQRLLLGVPVPALRHPFVQHLIRGERIMDPDAGVRRRV
LPSDSSREKMRSREDMQAFDGILGRDGPSTVSDNCIRNNEREPSKSIASR
SLRLDETNEAEDDGDNGGGRERVCGERIEGWAGVSTLKSNKHGVQTSRPI
VPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASNDSDQTGTQ
ADESPGSKADASSGTHLLFSRPVFDAMQCRPVNERLETLGDAWLNFYAGF
VIFQDKPVMREEGMMTLLRKNVVSNARLIKCADGRGLREFIYPPRTIRGQ
PFEMWLPSLLPLPPAVEVSQKIIADVVEALLGAALVAGGNRSAAFLMEWL
GLPTLEASNDPDEPLEHQQQQPREPEMVYVTTKPSARLMGSVRRLEQELS
YTFKHPWLCIQAITHPSWTMFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf