prot_P-canaliculata_contig104808.662.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig104808.662.1
Unique Nameprot_P-canaliculata_contig104808.662.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length189
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104808.662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 39..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104808contigP-canaliculata_contig104808:200..766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104808.662.1mRNA_P-canaliculata_contig104808.662.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig104808 200..766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig104808.662.1 ID=prot_P-canaliculata_contig104808.662.1|Name=mRNA_P-canaliculata_contig104808.662.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=189bp
WVWLVELIGGAAWASVILLALPGVFPALKGFDRIGHRDVLRISAAWFFVV
VERIIAKAVMYSPFALLFFLALWYIKLPSRLAFLVLAPLWLLIARYWYRV
VVEALSLTIDAELVEGKVSRQNPLHERVLEYVKAYCLRAGLDLPSSTFSK
ILFLPGSTPGIRTYGGGITETRIVIGANLLEFAMRGPHQ
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