prot_P-canaliculata_contig104635.636.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig104635.636.1
Unique Nameprot_P-canaliculata_contig104635.636.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length91
Homology
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BLAST of mRNA_P-canaliculata_contig104635.636.1 vs. uniprot
Match: UPI001C62ED68 (HdeA/HdeB family chaperone n=1 Tax=Qipengyuania flava TaxID=192812 RepID=UPI001C62ED68)

HSP 1 Score: 102 bits (254), Expect = 8.940e-26
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:    1 AAQTQDVNTPAEPTEPIAFDIAAISCWDITTTEDDEQAFAATLLYGYHAGSTGTNEQTSDGIEAAIVRMVEFCVENPDANALDGLK 86
            AA  +   T   P EP+ FD+A I+CWD++T+ED+++AFA+T+LYGY AG  G + Q S+ +EA IV  +EFCVENPD+ AL+  K
Sbjct:   72 AATEETAETAEAPAEPVEFDLAQITCWDLSTSEDEDRAFASTMLYGYAAGQAGQSAQNSEEVEARIVSAIEFCVENPDSMALEAFK 157
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BLAST of mRNA_P-canaliculata_contig104635.636.1 vs. uniprot
Match: A0A1B6ZER0_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6ZER0_9SPHN)

HSP 1 Score: 54.7 bits (130), Expect = 1.550e-7
Identity = 26/80 (32.50%), Postives = 42/80 (52.50%), Query Frame = 0 
Query:    1 AAQTQDVNTPAEPTEPIA-FDIAAISCWDITTTEDDEQAFAATLLYGYHAGSTGTNEQTSDGIEAAIVRMVEFCVENPDA 79
            +A  QD     +   P A  D+  ++CWDITT  +D++     LLYG   G  G +  + + ++ AIV  +  CV+ PD+
Sbjct:   26 SAIAQDAGQEIDALAPAASIDLKEVTCWDITTLNEDDRGATMILLYGQAIGEKGMSAISPEAVQVAIVTTIIDCVDKPDS 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104635.636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C62ED688.940e-2651.16HdeA/HdeB family chaperone n=1 Tax=Qipengyuania fl... [more]
A0A1B6ZER0_9SPHN1.550e-732.50Uncharacterized protein n=1 Tax=Sphingomonadales b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010486HNS-dependent expression A/BPFAMPF06411HdeAcoord: 18..82
e-value: 3.5E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104635contigP-canaliculata_contig104635:537..809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104635.636.1mRNA_P-canaliculata_contig104635.636.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig104635 537..809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig104635.636.1 ID=prot_P-canaliculata_contig104635.636.1|Name=mRNA_P-canaliculata_contig104635.636.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=91bp
AAQTQDVNTPAEPTEPIAFDIAAISCWDITTTEDDEQAFAATLLYGYHAG
STGTNEQTSDGIEAAIVRMVEFCVENPDANALDGLKSSPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010486HNS-dep_expression_A/B