prot_P-canaliculata_contig104377.600.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig104377.600.1
Unique Nameprot_P-canaliculata_contig104377.600.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length58
Homology
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BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: K2F5E2_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2F5E2_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.070e-9
Identity = 30/57 (52.63%), Postives = 33/57 (57.89%), Query Frame = 0 
Query:    1 MRAKPHVPSGFSTTPVRTIKLRKCMTAQPPWIGWSKSKSAASRSPLQRRPVFGTISV 57
            M A+P  PS FSTTP    +  K MTA   W GWSKSKSA SRSP  R P  G   +
Sbjct:   35 MPARPRPPSAFSTTPASPTRSAKSMTAPRRWTGWSKSKSAGSRSPRLRPPPSGNARL 91
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
K2F5E2_9BACT1.070e-952.63Uncharacterized protein n=1 Tax=uncultured bacteri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104377contigP-canaliculata_contig104377:585..758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104377.600.1mRNA_P-canaliculata_contig104377.600.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig104377 1..816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig104377.600.1 ID=prot_P-canaliculata_contig104377.600.1|Name=mRNA_P-canaliculata_contig104377.600.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=58bp
MRAKPHVPSGFSTTPVRTIKLRKCMTAQPPWIGWSKSKSAASRSPLQRRP
VFGTISV*
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