mRNA_P-canaliculata_contig104377.600.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A848V117_9PROT (Elongation factor G n=2 Tax=Hellea TaxID=574559 RepID=A0A848V117_9PROT) HSP 1 Score: 518 bits (1334), Expect = 5.020e-179 Identity = 257/272 (94.49%), Postives = 263/272 (96.69%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW KRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQF GVVDLVKNVAYTWP D+ELGA +DTVE+P +M K A+YREALIEAVA+MDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL
Sbjct: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWAGKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFKGVVDLVKNVAYTWPEDSELGATFDTVEIPADMADKAAKYREALIEAVAEMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A420WFN5_9PROT (Elongation factor G n=3 Tax=Robiginitomaculaceae TaxID=2800062 RepID=A0A420WFN5_9PROT) HSP 1 Score: 502 bits (1293), Expect = 8.020e-173 Identity = 250/272 (91.91%), Postives = 257/272 (94.49%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREY+LKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW +KRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKY VPRMIFINKMDK+GADFYASVQSVKDRLGGNALEMQLPIG+EDQF G+VDLV+NVAYTW D ELGAKYDT VPE+M K EYR ALIEAVADMDDAVMEAYFEGEMPDV TIQRLVR ATIANKVVPVFCGTAFKNKGVQPL
Sbjct: 1 MAREYELKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWKDKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYKVPRMIFINKMDKLGADFYASVQSVKDRLGGNALEMQLPIGSEDQFKGMVDLVENVAYTWEDDAELGAKYDTGPVPEDMLEKVEEYRTALIEAVADMDDAVMEAYFEGEMPDVATIQRLVRAATIANKVVPVFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: UPI00036A559E (elongation factor G n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00036A559E) HSP 1 Score: 491 bits (1265), Expect = 1.380e-168 Identity = 242/272 (88.97%), Postives = 253/272 (93.01%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREY+LKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW KRLNIIDTPGHVDFTIEVERSLRVLDGAV LLDANAGVEPQTETVWRQADKY VPRM+FINKMDK GADFYASV+SVK RLGGNALEMQLPIG+E +F GVVDLV+NVAY WP D +LGAKYDTVE+P +M K EYR ALIEAVADMDDAVMEAYFEGEMPD TI+RLVR+ATIANKVVPVFCGTAFKNKGVQPL
Sbjct: 1 MAREYELKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWAGKRLNIIDTPGHVDFTIEVERSLRVLDGAVTLLDANAGVEPQTETVWRQADKYKVPRMVFINKMDKTGADFYASVESVKKRLGGNALEMQLPIGSETEFRGVVDLVENVAYVWPDDADLGAKYDTVEIPADMVEKAKEYRTALIEAVADMDDAVMEAYFEGEMPDAATIKRLVRKATIANKVVPVFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A7C5LXC7_9PROT (GTP-binding protein (Fragment) n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5LXC7_9PROT) HSP 1 Score: 464 bits (1195), Expect = 1.210e-163 Identity = 229/272 (84.19%), Postives = 245/272 (90.07%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREY L+DYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW +KRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASV SV+ RLG NALEMQLPIGAE++F GVVDLVK AY W ++LGA Y+TVE+P E+ K AEY E LIEAV +MDD VMEAYFEG MP VE IQ L+R+ TIA ++VP+FCGTAFKNKGVQPL
Sbjct: 1 MAREYKLEDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWRDKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVASVRKRLGANALEMQLPIGAENEFKGVVDLVKMCAYVWEDTSDLGASYETVEIPAELADKAAEYHEKLIEAVVEMDDDVMEAYFEGNMPSVEQIQALIRKGTIACEIVPIFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A2G2GDR2_9PROT (Elongation factor G n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GDR2_9PROT) HSP 1 Score: 448 bits (1153), Expect = 1.130e-151 Identity = 216/272 (79.41%), Postives = 241/272 (88.60%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
M REY L+DYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW KRLNIIDTPGHVDFTIEVERSLRVLDGAV LLDANAGVEPQTETVWRQADKYNVPRM+FINKMDK+GADFYASV+S++ RLG NALEMQLPIGAE++F G++DLV+ AY W D +LGAK+DTV++P ++ K AEYRE L+EAV + DD +MEAY EG P E I+ +VR ATI+ +VVP+FCGTAFKNKGVQPL
Sbjct: 1 MTREYKLEDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWKGKRLNIIDTPGHVDFTIEVERSLRVLDGAVTLLDANAGVEPQTETVWRQADKYNVPRMVFINKMDKLGADFYASVESIRKRLGANALEMQLPIGAENEFSGMIDLVEMHAYVWAEDADLGAKFDTVDIPADLADKAAEYREKLVEAVVEYDDDLMEAYLEGTEPTNEQIKAIVRAATISGEVVPIFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A7Y1SLP5_9PROT (Elongation factor G n=2 Tax=Bacteria TaxID=2 RepID=A0A7Y1SLP5_9PROT) HSP 1 Score: 438 bits (1126), Expect = 1.340e-147 Identity = 213/272 (78.31%), Postives = 231/272 (84.93%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREY L+DYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW +KRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIF NKMDK+GADFYAS SVK RLG N + MQLPIGAE+ F G+VDLVK AY W +LGA YDT+++P ++ K EYRE LIE V + DD MEAY EG P E + L+R+ TIA +VP+FCGTAFKNKGVQPL
Sbjct: 1 MAREYKLEDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWKDKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFCNKMDKLGADFYASFDSVKKRLGANVVAMQLPIGAENDFKGMVDLVKMKAYVWEDVADLGASYDTIDIPADLADKAVEYRETLIETVVEFDDEAMEAYLEGNEPSEEKLMALIRKGTIAGDIVPMFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A2G1Y601_9PROT (Elongation factor G n=5 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1Y601_9PROT) HSP 1 Score: 437 bits (1124), Expect = 2.680e-147 Identity = 212/272 (77.94%), Postives = 238/272 (87.50%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
M+REY ++DYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFW KRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIF+NKMDK+GADF+AS +SV RLG AL MQLPIGAE+ FVG+VDL++ AY W D ELGAK+ T ++P ++ + AEYRE L+E VA++DD VMEAY EGE ET++RL+R+ T+ +VPVFCGTAFKNKGVQPL
Sbjct: 1 MSREYKIEDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWRGKRLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFVNKMDKLGADFFASFESVVKRLGAPALAMQLPIGAENDFVGMVDLIEMCAYVWADDAELGAKFXTTDIPADLVDQAAEYREKLVEMVAELDDDVMEAYLEGETIXNETLKRLIRKGTLEGTLVPVFCGTAFKNKGVQPL 272
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A7C5MVF3_9HYPH (GTP-binding protein (Fragment) n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5MVF3_9HYPH) HSP 1 Score: 412 bits (1060), Expect = 2.200e-143 Identity = 200/277 (72.20%), Postives = 234/277 (84.48%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNK-----RLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAR YD+K+YRNFGIMAHIDAGKTT TERILYYTGK+HKI EVHDGAATMDWMEQEQERGITITSAATT FW ++ R NIIDTPGHVDFTIEVERSLRVLDGA+ALLDANAGVEPQTETVWRQADKY+VPRMIF+NKMDK+GADFY SV+ ++ RLGG +L +QLPIGAE++F GV+DL++ A W D LGA++D VE+PE+M+ K E+RE +IE D+DDA EAY EGEMPD++T++RL+R+ TI PV CG+AFKNKGVQPL
Sbjct: 1 MARVYDIKNYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWKDRKGVEHRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQADKYDVPRMIFVNKMDKVGADFYRSVEMIESRLGGKSLVLQLPIGAENEFSGVIDLIEMKALVWR-DESLGAQWDVVEIPEDMREKAEEFREQMIERAVDIDDAATEAYLEGEMPDIDTLRRLIRQGTIGVDFFPVLCGSAFKNKGVQPL 276
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A3B1B8Q2_9ZZZZ (Translation elongation factor G (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1B8Q2_9ZZZZ) HSP 1 Score: 409 bits (1051), Expect = 3.330e-140 Identity = 201/277 (72.56%), Postives = 233/277 (84.12%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNK-----RLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREYD+KDYRNFGIMAHIDAGKTT TERILYYTGK+HKI EVHDGAATMDWMEQEQERGITITSAATT FW+++ R NIIDTPGHVDFTIEVERSLRVLDGA+ALLDANAGVEPQTETVWRQADKY VPRMIF+NKMDKIGADFY V+ ++ RLGG + MQLPIGAE +FVGVVDL++ A W + +LGA++D VE+P+++K + EYR +IE +AD+DD VM AY EGEMPD +TI++L+R+ T PV CG+AFKNKGVQPL
Sbjct: 1 MAREYDIKDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWNDRNGKKHRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQADKYKVPRMIFVNKMDKIGADFYRCVEMIESRLGGTPVVMQLPIGAESEFVGVVDLIEMHALVWRTE-DLGAQWDIVEIPDDLKERAEEYRMKMIETIADLDDDVMIAYLEGEMPDNDTIRKLIRKGTCDVAFFPVLCGSAFKNKGVQPL 276
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Match: A0A7Y2QAN8_9HYPH (Elongation factor G (Fragment) n=1 Tax=Rhizobium sp. SEMIA 4085 TaxID=2137761 RepID=A0A7Y2QAN8_9HYPH) HSP 1 Score: 408 bits (1049), Expect = 6.410e-139 Identity = 206/277 (74.37%), Postives = 229/277 (82.67%), Query Frame = 1
Query: 1 MAREYDLKDYRNFGIMAHIDAGKTTCTERILYYTGKNHKIAEVHDGAATMDWMEQEQERGITITSAATTCFWDNK-----RLNIIDTPGHVDFTIEVERSLRVLDGAVALLDANAGVEPQTETVWRQADKYNVPRMIFINKMDKIGADFYASVQSVKDRLGGNALEMQLPIGAEDQFVGVVDLVKNVAYTWPVDTELGAKYDTVEVPEEMKAKTAEYREALIEAVADMDDAVMEAYFEGEMPDVETIQRLVREATIANKVVPVFCGTAFKNKGVQPL 816
MAREY ++DYRNFGIMAHIDAGKTT TERILYYTGK+HKI EVHDGAATMDWMEQEQERGITITSAATT FW + R NIIDTPGHVDFTIEVERSLRVLDGA+ALLDANAGVEPQTETVWRQA+KY+VPRMIF NKMDK GADFY SV+ +K RLG A+ MQLPIGAE +F GVVDL++ A W D LGA++D VE+PE+MKAK EYRE LIE V ++D+A MEAY EG MPD + I+ LVR TI K P+FCGTAFKNKGVQPL
Sbjct: 1 MAREYKIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWKGRDGKMRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQAEKYHVPRMIFCNKMDKTGADFYRSVEMIKTRLGATAVVMQLPIGAETEFKGVVDLIEMNALIWR-DESLGAQWDVVEIPEDMKAKAEEYREKLIETVVEIDEAAMEAYLEGNMPDNDQIRALVRRGTIDVKFHPMFCGTAFKNKGVQPL 276 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104377.600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig104377.600.1 >prot_P-canaliculata_contig104377.600.1 ID=prot_P-canaliculata_contig104377.600.1|Name=mRNA_P-canaliculata_contig104377.600.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=58bp MRAKPHVPSGFSTTPVRTIKLRKCMTAQPPWIGWSKSKSAASRSPLQRRPback to top mRNA from alignment at P-canaliculata_contig104377:1..816- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig104377.600.1 ID=mRNA_P-canaliculata_contig104377.600.1|Name=mRNA_P-canaliculata_contig104377.600.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=816bp|location=Sequence derived from alignment at P-canaliculata_contig104377:1..816- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig104377:1..816- >mRNA_P-canaliculata_contig104377.600.1 ID=mRNA_P-canaliculata_contig104377.600.1|Name=mRNA_P-canaliculata_contig104377.600.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=348bp|location=Sequence derived from alignment at P-canaliculata_contig104377:1..816- (Pelvetia canaliculata dioecious)back to top |