prot_P-canaliculata_contig104174.569.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig104174.569.1
Unique Nameprot_P-canaliculata_contig104174.569.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length71
Homology
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: UPI00167B7F35 (hypothetical protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167B7F35)

HSP 1 Score: 99.8 bits (247), Expect = 1.540e-25
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    2 SWFLLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            SWFLLFL+GV+LTVTL+FVKTHAQSAKR+VR LTR IAA++ +I+VLRAE AYLESP RLSELN+ +L L
Sbjct:   20 SWFLLFLVGVALTVTLYFVKTHAQSAKRDVRVLTRAIAAEDAAIRVLRAELAYLESPTRLSELNDLHLNL 89          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: UPI0003FDA858 (hypothetical protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003FDA858)

HSP 1 Score: 66.6 bits (161), Expect = 1.810e-12
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MSWFLLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            M+ F+LFLIGV+LTV L++VKT +Q+A+++   L R+I+ +E ++ VL+AE AYLESP RL +L++ +L L
Sbjct:   16 MTGFILFLIGVALTVGLYYVKTRSQTARKQSAALERQISQEEANLSVLQAEIAYLESPDRLKQLSQRHLGL 86          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: A0A420WL53_9PROT (Uncharacterized protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WL53_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 2.060e-9
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MSWFLLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYL 69
            +S F+LF+IGVSLT+ LF+VKT AQ+A + V  + R I  ++ +I VL AE AY +SP RL+ L++  L
Sbjct:   14 LSAFVLFVIGVSLTIALFYVKTRAQTAHKNVVKIERAIEKEKAAIAVLEAEIAYSQSPERLAALSKAQL 82          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: UPI0012EA070E (hypothetical protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0012EA070E)

HSP 1 Score: 55.1 bits (131), Expect = 3.750e-8
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    5 LLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            LL LIG  L   L+  KT A+S  +++  L  ++ A+  +I+VL AE AYL++PARLS+L+ TYL+L
Sbjct:    9 LLILIGFGLVAALYITKTEAKSVGKDMERLQSDLQAEIYAIRVLEAEIAYLQNPARLSDLSRTYLEL 75          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: A0A8J3CS62_9PROT (Uncharacterized protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CS62_9PROT)

HSP 1 Score: 49.7 bits (117), Expect = 5.360e-6
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0
Query:    4 FLLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            FLL ++G+ LT+ LFFVKT AQ A+ EV  L  +I   E +I VL AE A L +  RL +L+   L L
Sbjct:   21 FLLIVLGLGLTMMLFFVKTRAQDARDEVSRLEAQIEEHELAISVLSAEAAVLSNSERLRQLSRDRLAL 88          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: A0A2A4YXL0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4YXL0_9PROT)

HSP 1 Score: 50.1 bits (118), Expect = 7.590e-6
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   20 VKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            V  H Q A+R+++ L REIA +EESI+VL+AE AYL +P RL  L   Y+ L
Sbjct:   25 VSHHVQRAERDIKHLDREIAREEESIRVLKAEWAYLNNPVRLEALAADYVDL 76          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: A0A7V9T381_9RICK (Uncharacterized protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A7V9T381_9RICK)

HSP 1 Score: 48.5 bits (114), Expect = 2.360e-5
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   16 TLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            TLF +K +  S K E+ ++  ++  + + I +L+AE AYL SPARL +LN+ Y+KL
Sbjct:   21 TLFTIKENVMSIKSELTEVNSQVQDEVDKIHLLKAELAYLTSPARLKDLNDQYIKL 76          
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Match: A0A2A4VCI4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4VCI4_9PROT)

HSP 1 Score: 48.1 bits (113), Expect = 4.150e-5
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   20 VKTHAQSAKREVRDLTREIAAQEESIQVLRAEKAYLESPARLSELNETYLKL 71
            V  H Q A+R+++ L  EIA +EESI+VL+AE AYL +P RL  L   Y+ L
Sbjct:   25 VSHHVQRAERDIKRLDHEIAREEESIRVLKAEWAYLNNPVRLEALATDYIDL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104174.569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI00167B7F351.540e-2575.71hypothetical protein n=1 Tax=Litorimonas cladophor... [more]
UPI0003FDA8581.810e-1250.70hypothetical protein n=1 Tax=Hellea balneolensis T... [more]
A0A420WL53_9PROT2.060e-949.28Uncharacterized protein n=1 Tax=Litorimonas taeane... [more]
UPI0012EA070E3.750e-846.27hypothetical protein n=1 Tax=Robiginitomaculum ant... [more]
A0A8J3CS62_9PROT5.360e-647.06Uncharacterized protein n=1 Tax=Algimonas arctica ... [more]
A0A2A4YXL0_9PROT7.590e-651.92Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A7V9T381_9RICK2.360e-542.86Uncharacterized protein n=1 Tax=Rickettsiaceae bac... [more]
A0A2A4VCI4_9PROT4.150e-550.00Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePRODOMPD201674coord: 4..71
e-value: 7.0E-6
score: 112.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.779
NoneNo IPR availableTMHMMTMhelixcoord: 4..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104174contigP-canaliculata_contig104174:5..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104174.569.1mRNA_P-canaliculata_contig104174.569.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig104174 5..220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig104174.569.1 ID=prot_P-canaliculata_contig104174.569.1|Name=mRNA_P-canaliculata_contig104174.569.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=71bp
MSWFLLFLIGVSLTVTLFFVKTHAQSAKREVRDLTREIAAQEESIQVLRA
EKAYLESPARLSELNETYLKL
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