prot_P-canaliculata_contig103339.475.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig103339.475.1
Unique Nameprot_P-canaliculata_contig103339.475.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length85
Homology
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BLAST of mRNA_P-canaliculata_contig103339.475.1 vs. uniprot
Match: D8LGL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL4_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.380e-22
Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:    1 KEVSLNSVESTLWSLEDNTETEDEIMEGDPLDLGEIAAQAVTLCIDPFAKRP-----GTAGSAGHQQSD---------EGEEEVIDVAAMNAFFGNDE 84
            +EVSL+SV+STLW+LE++TET+DEIMEGDPLDLGE+AAQ + LCIDP+AK P       AGS   + +          EGE+ V+DV  M AFF  D+
Sbjct:  222 QEVSLDSVQSTLWALEEDTETDDEIMEGDPLDLGEVAAQGLALCIDPYAKHPDFVASSDAGSGNGEGATVPGRFGMPAEGEDVVLDVDTMKAFFDADD 319
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103339.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGL4_ECTSI2.380e-2254.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103339contigP-canaliculata_contig103339:102..356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103339.475.1mRNA_P-canaliculata_contig103339.475.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig103339 102..356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig103339.475.1 ID=prot_P-canaliculata_contig103339.475.1|Name=mRNA_P-canaliculata_contig103339.475.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=85bp
KEVSLNSVESTLWSLEDNTETEDEIMEGDPLDLGEIAAQAVTLCIDPFAK
RPGTAGSAGHQQSDEGEEEVIDVAAMNAFFGNDE*
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