prot_P-canaliculata_contig1031.457.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1031.457.1
Unique Nameprot_P-canaliculata_contig1031.457.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length228
Homology
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 453 bits (1166), Expect = 1.180e-159
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMIDVLNRCYK+EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM   IW MRNYHE DPIILSVGEEDEVSIADAAKMIA+AMDFEGNVVFDTDKSDGQFKKTACNDLLK+ NP FKFTPM EGLK AC+WFCENYETARK
Sbjct:  104 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM---IWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMDFEGNVVFDTDKSDGQFKKTACNDLLKQKNPDFKFTPMKEGLKQACEWFCENYETARK 327          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A6H5JCJ7_9PHAE (GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ7_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 8.210e-125
Identity = 174/183 (95.08%), Postives = 176/183 (96.17%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYK--DEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDK 181
            MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYK  DEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM   IW MRNYHE DPIILSVGEEDEVSIADAAKMIA+AM+FEGNVVFDTDK
Sbjct:   35 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKVPDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM---IWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDK 214          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.900e-123
Identity = 168/226 (74.34%), Postives = 188/226 (83.19%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETAR 226
            MECCRIYKV+KLVSCLSTC+FPDKTTYPIDETMVH GPPH+SNEGYAYAKRMIDV+NRCY+DEYGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G    +WG+GSPLRQFIYNVDLGALM   +W +R+Y   DPIILSVGEEDEVSIADAA+M+A  M + G VVFDT K+DGQFKKTA N  L+ L P FKFTPM +GL   C WF  N   AR
Sbjct:   89 MECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKNGTPFTIWGSGSPLRQFIYNVDLGALM---VWVLRSYDSVDPIILSVGEEDEVSIADAARMVAKGMAYSGEVVFDTTKADGQFKKTASNARLRALRPDFKFTPMAQGLAETCAWFKANSAVAR 311          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A7S4EAF3_9STRA (GDP-L-fucose synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA)

HSP 1 Score: 358 bits (918), Expect = 5.270e-122
Identity = 168/227 (74.01%), Postives = 186/227 (81.94%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MECCRIYKV+KLVSCLSTCIFPDKTTYPIDETM+H+G PH SNEGYAYAKRMIDV+NRCYKDEYGCNFTSVIPTNIYG  DN+SI  GHV+PGLIHKCY AK+ G    VWGTGSPLRQFIY+ DL AL    +W +R+Y  TDPIILSV EE EV+I D A MI  AM+F+G V F TDK+DGQ+KKTA N+ L  L P F+FTPM EGLK ACDWFC NYET RK
Sbjct:   98 MECCRIYKVQKLVSCLSTCIFPDKTTYPIDETMIHDGAPHLSNEGYAYAKRMIDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKNGTPFEVWGTGSPLRQFIYSGDLAALT---VWVLRSYDSTDPIILSVPEEKEVTIKDVALMIRDAMEFKGEVKFLTDKADGQYKKTASNEKLAGLRPDFQFTPMAEGLKKACDWFCANYETCRK 321          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A7S3H4T7_9STRA (GDP-L-fucose synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA)

HSP 1 Score: 358 bits (918), Expect = 5.450e-122
Identity = 164/227 (72.25%), Postives = 190/227 (83.70%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MEC R + V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH+SN GYAYAKRMIDV+N+CY +EYGCN+TS+IPTNIYG  DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL  L    +W MR YH  +PIILSVGEEDEVSIAD A+ +A AM FEGN+VFDT KSDGQ+KKTA N  L++L P F+FTP+ +GL+ ACDWF  NYETARK
Sbjct:   96 MECSREFNVVKLVSCLSTCIFPDKTTYPIDETMVHDGPPHSSNAGYAYAKRMIDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRDGTDLTIWGTGSPLRQFIYSEDLARLT---VWVMREYHSPEPIILSVGEEDEVSIADVARAVAKAMKFEGNIVFDTTKSDGQYKKTASNKKLRELYPDFEFTPIDQGLQQACDWFVANYETARK 319          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: F0YA35_AURAN (GDP-L-fucose synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA35_AURAN)

HSP 1 Score: 352 bits (904), Expect = 6.840e-120
Identity = 165/227 (72.69%), Postives = 187/227 (82.38%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MECCRIYKVEKLVSCLSTCIFPDKT+YPIDE+MVH+G PH+SNEGYAYAKRMI+V+NRCY +EYGC FT+VIPTNIYG  DNFS++ GHV+PGLIHKCY AK+ G    VWG+G+PLRQFIY+VDL AL    +W MR+Y   D IILSVGEEDEVSI D A MI  AM FEG V+FDTDK+DGQ+KKTA ND LK L P FKFTPM EGL+ A DWF  NY+T RK
Sbjct:   97 MECCRIYKVEKLVSCLSTCIFPDKTSYPIDESMVHDGAPHSSNEGYAYAKRMIEVMNRCYAEEYGCKFTAVIPTNIYGPHDNFSVNGGHVVPGLIHKCYVAKRDGTPFTVWGSGTPLRQFIYSVDLAALT---VWVMRSYDSADSIILSVGEEDEVSIKDVALMIRDAMKFEGEVIFDTDKADGQYKKTASNDKLKGLRPDFKFTPMREGLQKAVDWFVANYDTCRK 320          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 352 bits (903), Expect = 7.250e-119
Identity = 163/228 (71.49%), Postives = 189/228 (82.89%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFE-GNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MECCRI+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDVLNRCY DEYGCN TS+IPTNIYG  DNF+I+NGHV+PGLIHK + AKQ+GEDLH+WG+G+PLRQFI++ DL AL    +W +R+YH+ +PIILSVGEE+EVSI D A M+A A       VVFDTDKSDGQFKKTACN  L+KL P +KF P+ EG++ + DWF  NYE ARK
Sbjct:  156 MECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCYSDEYGCNMTSIIPTNIYGPHDNFNIENGHVIPGLIHKAFLAKQSGEDLHIWGSGTPLRQFIFSQDLAALT---VWTLRDYHDPEPIILSVGEEEEVSIKDVALMVAEASGLPLERVVFDTDKSDGQFKKTACNKKLRKLQPSYKFKPIKEGIQESVDWFFANYEAARK 380          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A7S1PSM9_ALECA (GDP-L-fucose synthase n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S1PSM9_ALECA)

HSP 1 Score: 340 bits (873), Expect = 3.520e-115
Identity = 156/227 (68.72%), Postives = 184/227 (81.06%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MECCRI+ V+KL+SCLSTCIFPDKTT+PIDETM+HNGPPH SN GYA AKRM+DVLN CYKD+YG NFTSVIPTNIYG  DNFSI++GHV+PGLIHKCY AK+   D  +WG+GSPLRQFIY+ DL  L    +WA+RNY   DPIILSVGEEDEV+I + A++I  AM+F+GN V DT K+DGQ KKTA N  L+ + P +KFTP+ EG+K A DWF  NYETARK
Sbjct:   97 MECCRIHGVKKLLSCLSTCIFPDKTTFPIDETMIHNGPPHDSNVGYAVAKRMVDVLNHCYKDQYGLNFTSVIPTNIYGPHDNFSIEDGHVIPGLIHKCYMAKRDNTDFVIWGSGSPLRQFIYSTDLAELT---VWALRNYESVDPIILSVGEEDEVTIKEVAELIVEAMEFKGNFVCDTSKADGQHKKTASNQKLRSMRPDYKFTPIREGIKQAVDWFVANYETARK 320          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA)

HSP 1 Score: 350 bits (897), Expect = 4.400e-115
Identity = 159/227 (70.04%), Postives = 187/227 (82.38%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            ME C+ +KVEKLVSCLSTCIFPDKTTYPIDETM+HNGPPH SNEGYAYAKRM+DV++RCYK+EYGCNFTS+IPTNIYG  DNF+I +GHV+PGL+HKCY A+QAG D  +WG+G PLRQFIY+ DL  L+   IW MR YH  DP+ILSVGEEDEVSI   A+ +A AM+F+GNVVFDT K+DGQ+KKTA N  L+ L P F+FT + EGL+  C WF ENY TARK
Sbjct:  373 MEACKDFKVEKLVSCLSTCIFPDKTTYPIDETMIHNGPPHASNEGYAYAKRMLDVMSRCYKEEYGCNFTSIIPTNIYGPHDNFNIQDGHVIPGLVHKCYLAEQAGTDFTIWGSGKPLRQFIYSRDLAELI---IWTMREYHSADPLILSVGEEDEVSIGTLAETVAKAMEFKGNVVFDTSKADGQYKKTASNLKLRSLRPDFRFTSIEEGLEKTCAWFKENYATARK 596          
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Match: A0A1E7EWI6_9STRA (GDP-L-fucose synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWI6_9STRA)

HSP 1 Score: 338 bits (867), Expect = 3.760e-114
Identity = 154/227 (67.84%), Postives = 180/227 (79.30%), Query Frame = 0
Query:    1 MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSVGEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNPGFKFTPMPEGLKAACDWFCENYETARK 227
            MEC RIYKV+KLV  LSTCIFPDKTTYPIDETM+HNGPPH SNEGYAYAKRMID +NR Y +EY CNFTS+IPTNIYGK DNFSI+ GHV+PGLIHKCYKAKQ G    +WG+G+PLRQF+Y+ DL  L    +W  R Y+E DPIILSV E+DEV+I D A  +A A +FEG + FDT KSDGQ+KKTACN  L+K  P +KFT MP+G++ + DWF  NYET RK
Sbjct:  105 MECSRIYKVQKLVGMLSTCIFPDKTTYPIDETMIHNGPPHHSNEGYAYAKRMIDTMNRAYNEEYNCNFTSIIPTNIYGKSDNFSIETGHVIPGLIHKCYKAKQDGTPFCIWGSGTPLRQFVYSRDLAELT---VWVTREYNEADPIILSVDEDDEVTIKDVALAVAKAHNFEGKIEFDTSKSDGQYKKTACNMKLRKYRPDYKFTSMPDGIQKSVDWFVANYETCRK 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1031.457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6RJN1_SACJA1.180e-15993.83GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2... [more]
A0A6H5JCJ7_9PHAE8.210e-12595.08GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836C923_9STRA1.900e-12374.34GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S4EAF3_9STRA5.270e-12274.01GDP-L-fucose synthase n=2 Tax=Pelagomonas calceola... [more]
A0A7S3H4T7_9STRA5.450e-12272.25GDP-L-fucose synthase n=2 Tax=Spumella elongata Ta... [more]
F0YA35_AURAN6.840e-12072.69GDP-L-fucose synthase n=1 Tax=Aureococcus anophage... [more]
A0A6T7DWV8_9STRA7.250e-11971.49GDP-L-fucose synthase n=1 Tax=Florenciella parvula... [more]
A0A7S1PSM9_ALECA3.520e-11568.72GDP-L-fucose synthase n=2 Tax=Alexandrium TaxID=29... [more]
W7TZW1_9STRA4.400e-11570.04GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A1E7EWI6_9STRA3.760e-11467.84GDP-L-fucose synthase n=1 Tax=Fragilariopsis cylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.25.10coord: 137..227
e-value: 2.0E-10
score: 42.7
NoneNo IPR availableGENE3D3.40.50.720coord: 1..123
e-value: 9.4E-26
score: 92.5
NoneNo IPR availablePANTHERPTHR43238:SF1GDP-L-FUCOSE SYNTHASEcoord: 2..227
NoneNo IPR availablePANTHERPTHR43238FAMILY NOT NAMEDcoord: 2..227
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 2..139
e-value: 4.5E-29
score: 101.6
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1031contigP-canaliculata_contig1031:25227..27462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1031.457.1mRNA_P-canaliculata_contig1031.457.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1031 24333..27540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1031.457.1 ID=prot_P-canaliculata_contig1031.457.1|Name=mRNA_P-canaliculata_contig1031.457.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=228bp
MECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAK
RMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYK
AKQAGEDLHVWGTGSPLRQFIYNVDLGALMASGIWAMRNYHETDPIILSV
GEEDEVSIADAAKMIATAMDFEGNVVFDTDKSDGQFKKTACNDLLKKLNP
GFKFTPMPEGLKAACDWFCENYETARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf