prot_P-canaliculata_contig1031.456.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig1031.456.1
Unique Name	prot_P-canaliculata_contig1031.456.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	138

Homology

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: D7FW32_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW32_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 7.540e-44
Identity = 74/122 (60.66%), Postives = 98/122 (80.33%), Query Frame = 0

Query:    1 MIYDVVPTTPYLTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIEPALGPMARFRNKRLLLKAVEEDDRITEDTFQ 122
            M++DVVPTT YLTPLD F+ FDLDGGGD+SW+EFKEAAE+I   K+ E +  +LFD VD++KSG I+Y EFKQ WL +V+LEQE+K RG +PA GPM+  RN+R+L +AVE++DR T + F+
Sbjct:  297 MMHDVVPTTSYLTPLDSFNVFDLDGGGDISWVEFKEAAEVIAGGKLNEEQTKELFDKVDTDKSGVIEYEEFKQAWLAMVNLEQEIKARGRKPAFGPMSSTRNRRILAQAVEDEDRATTEVFK 418

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A6H5JF42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF42_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.870e-42
Identity = 73/122 (59.84%), Postives = 97/122 (79.51%), Query Frame = 0

Query:    1 MIYDVVPTTPYLTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIEPALGPMARFRNKRLLLKAVEEDDRITEDTFQ 122
            M++DVVPTT +LTPLD F+ FDLDGGGD+SW+EFKEAAE+I   K+ E +   LFD VD++KSG I+Y EFKQ WL +V+LEQE+K RG +PA GPM+  RN+R+L +AVE++DR T + F+
Sbjct:  297 MMHDVVPTTSHLTPLDSFNVFDLDGGGDISWVEFKEAAEVIAGGKLNEEQTKGLFDKVDTDKSGVIEYEEFKQAWLAMVNLEQEIKARGRKPAFGPMSSTRNRRILAQAVEDEDRATTEVFK 418

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A329T505_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T505_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 6.790e-11
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIEPALGPMARFRNKRLLLKAVEEDDRITE 118
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D++KSG I Y EF+ +W++LVD+ +E+ +RG+E  +    R    + +L+A+ E++   E
Sbjct:  169 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKQYDTDKSGYIDYQEFRSMWIKLVDVREELTKRGVE--VPKHIRLVKLQQMLEAILEEEEARE 272

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A8J5JEG2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JEG2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.150e-11
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIEPALGPMARFRNKRLLLKAVEEDDRITE 118
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W++LVD+ +E+ +RG+E  +    R    + +L+A+ E++   E
Sbjct:  169 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKQYDKDKSGYIDYQEFRSMWIKLVDVREELTKRGVE--VPKHIRLVKLQQMLEAILEEEEARE 272

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: W2QAT0_PHYPN (Uncharacterized protein n=50 Tax=Phytophthora TaxID=4783 RepID=W2QAT0_PHYPN)

HSP 1 Score: 68.2 bits (165), Expect = 1.260e-10
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W++LVD+ +E+ +RG+E
Sbjct:  169 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKKYDKDKSGHIDYQEFRSMWIKLVDVREELTKRGVE 247

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: D0NE77_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NE77_PHYIT)

HSP 1 Score: 67.4 bits (163), Expect = 2.120e-10
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W++LVD+ +E+ +RG+E
Sbjct:  169 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFRKYDRDKSGYIDYQEFRSMWIKLVDVREELTKRGVE 247

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A833SZ31_PHYIN (Regulator of chromosome condensation (RCC1) repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SZ31_PHYIN)

HSP 1 Score: 67.0 bits (162), Expect = 3.190e-10
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W++LVD+ +E+ +RG+E
Sbjct:  169 LGPRDAFELFDEDGTGKIDELEFADVLEYFGM-DVSDEKQEKIFRKYDRDKSGYIDYQEFRSMWIKLVDVREELTKRGVE 247

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A6G0PHW7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0PHW7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.690e-10
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W+ LVD+  E+ +RG+E
Sbjct:  172 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKKYDKDKSGYIDYQEFRSMWVRLVDVRDELTKRGVE 250

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A6A3TWF4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TWF4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.060e-10
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W+ LVD+  E+ +RG+E
Sbjct:  172 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKKYDKDKSGYIDYQEFRSMWVRLVDVRDELTKRGVE 250

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BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Match: A0A6A4G1P3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1P3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.300e-10
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 0

Query:   12 LTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPRLTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIE 91
            L P D F+ FD DG G +  LEF +  E  G   +++ +  K+F   D +KSG I Y EF+ +W+ LVD+  E+ +RG+E
Sbjct:  195 LGPRDAFELFDEDGTGQIDELEFADVLEYFGM-DVSDEKQEKIFKKYDKDKSGYIDYQEFRSMWVRLVDVRDELTKRGVE 273

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig1031.456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
D7FW32_ECTSI	7.540e-44	60.66	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JF42_9PHAE	3.870e-42	59.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A329T505_9STRA	6.790e-11	34.58	Uncharacterized protein n=1 Tax=Phytophthora cacto...	[more]
A0A8J5JEG2_9STRA	9.150e-11	34.58	Uncharacterized protein n=1 Tax=Phytophthora aleat...	[more]
W2QAT0_PHYPN	1.260e-10	40.00	Uncharacterized protein n=50 Tax=Phytophthora TaxI...	[more]
D0NE77_PHYIT	2.120e-10	40.00	Uncharacterized protein n=1 Tax=Phytophthora infes...	[more]
A0A833SZ31_PHYIN	3.190e-10	40.00	Regulator of chromosome condensation (RCC1) repeat...	[more]
A0A6G0PHW7_9STRA	3.690e-10	40.00	Uncharacterized protein n=1 Tax=Phytophthora fraga...	[more]
A0A6A3TWF4_9STRA	4.060e-10	40.00	Uncharacterized protein n=1 Tax=Phytophthora fraga...	[more]
A0A6A4G1P3_9STRA	4.300e-10	40.00	Uncharacterized protein n=2 Tax=Phytophthora rubi ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 15..89 e-value: 9.7E-13 score: 49.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 18..74 e-value: 2.5E-7 score: 31.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 46..81 score: 10.301
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 18..44 score: 8.99
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 16..122

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig1031	contig	P-canaliculata_contig1031:4154..4998 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig1031.456.1	mRNA_P-canaliculata_contig1031.456.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig1031 2057..4998 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig1031.456.1 ID=prot_P-canaliculata_contig1031.456.1|Name=mRNA_P-canaliculata_contig1031.456.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=138bp
MIYDVVPTTPYLTPLDWFDTFDLDGGGDLSWLEFKEAAEIIGRAKITEPR
LTKLFDNVDSNKSGAIKYTEFKQVWLELVDLEQEVKRRGIEPALGPMARF
RNKRLLLKAVEEDDRITEDTFQARFEKRGGNGADFGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair