prot_P-canaliculata_contig103066.445.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig103066.445.1
Unique Nameprot_P-canaliculata_contig103066.445.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length286
Homology
BLAST of mRNA_P-canaliculata_contig103066.445.1 vs. uniprot
Match: A0A7X0H8X3_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H8X3_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 5.210e-21
Identity = 98/291 (33.68%), Postives = 141/291 (48.45%), Query Frame = 0
Query:    1 MPRARLKRRESLIKFARRAALEALDRTAARLEPARKADAAAAAAALREMRFLVQLLREPLGPVAYARDQAALDRLLRRLDPAAGRGLIEAAQTLSRLADTKPALSVPDECTPRALIA--AQRKGRGRR----EPARLRTLADVAELRLRARHWHLSETGFASLAAPLR----RACRLAASGRGAGAAA-----LAHHLHCLDRMWPEALAVPRESAHRMARAAQRIEALTALEVRLPESPDHDPLRARLTAHRDTLRKVVTENAA---RLGAETPAAFSRRLHNYWNLWRG 273
            MP   +KR + ++K  RR A   LD     L     AD AAA   L+ ++ L+   R PLG   + R+   + R L++L P A   L     TL+ +A+  P L V  +     LIA  A+ K R R+    +P +LR +AD+AELR+RAR+WHL + GF  L   LR    RA +L  +   A   A     LA  L   +R  P  L   R++   + R A++   L AL    P +  H+ L AR+    +TL +   + A    +L  ET  AF +R+  YW  WRG
Sbjct:    1 MPPLLIKRTDPIVKAVRRGATRQLDAAIESLTGNGSADPAAARRELQRLQALLHQFRRPLGGEVFNREHRQVVRCLKQLSPVADLRL----DTLADVANQDPKLDV--QALREQLIADTAEAKPRKRKKQGPDPKQLRLVADLAELRMRARYWHLPDGGFELLTPGLRLSYQRAAKLVQTNGPAADTADALDRLALQLQSFERACPVLLEPYRKALRALERNARKQAQLAALR---PATEQHEALLARID---ETLAQYGQDTARLRQQLFVETTPAFLKRMQGYWTAWRG 279          
BLAST of mRNA_P-canaliculata_contig103066.445.1 vs. uniprot
Match: UPI00167AE9E0 (CHAD domain-containing protein n=1 Tax=Lysobacter bugurensis TaxID=543356 RepID=UPI00167AE9E0)

HSP 1 Score: 54.3 bits (129), Expect = 7.480e-5
Identity = 86/295 (29.15%), Postives = 118/295 (40.00%), Query Frame = 0
Query:    5 RLKRRESLIKFARRAALEALDRT--AARLEPARKADAAAAAAALREMRFLVQLLREPLGPVAYARDQAALDRLLRRLDPAAGRGLIEAAQTLSRLADTKPALSVPDECTPRALIAAQRKGRGR---REPARLRTLADVAELRLRARHWHLSETGFASLAAPLRRACRLAASGRGAGAAA------------LAHHLHCLDRM---WPEALAVPRESAHRMARAAQRIEALTALEVRLPESPDHDPLR---AR----LTAHRDTLRKVVTENAARLGAETPAAFSRRLHNYWNLWR 272
            R++R+ES+    RR ALE +D    +A  + A    A A     +++R L++L+R  L    Y R+Q A   + RRL P   R       TL RL D    L+  D  T R  + A R         E  R      + E R R   W L +T F+++   L R  R    G  A A+             + +H   LD +   W   L+   + A  +A           L   L    D D +R   AR    L A    L +     AARL AE P AF RR+  YW  WR
Sbjct:    4 RIRRKESIEIALRRIALEQIDAMLKSADSDGAPGDVAHAIRKRCKKLRALLRLVRGSLD--GYGREQRAARDVARRLAPV--RDAAVRLDTLDRLTDGHDGLNQSDAETLRNWLDASRTNALHALAHEEVRAEVRIALREQRERVASWTLDDTSFSAIRDGLSRTYRRGRDGARACASTPTPDGLHELRKRVKYHRFQLDLLRGLWRGPLSAASDEAGALAEVLGDHHDAAVLVDALRAHIDDDAIRDAAARAIPLLEARMRELERRALAPAARLFAEKPKAFERRMRAYWRAWR 294          
BLAST of mRNA_P-canaliculata_contig103066.445.1 vs. uniprot
Match: U5QQZ3_9CYAN (CHAD domain-containing protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QQZ3_9CYAN)

HSP 1 Score: 54.3 bits (129), Expect = 7.940e-5
Identity = 89/302 (29.47%), Postives = 125/302 (41.39%), Query Frame = 0
Query:   17 RRAALEALDRTAARL--EPARKADAAAAAAA--LREMRFLVQLLREPLGPVAYARDQAALDRLLRRLDPAAGRGLIEA------AQTLSRLADTKPALSVPDECTPRALIA---AQRKGRGRREPARLRTLADVAE----LRLRARHWHLSETGFASLAAPLRRACRLAASGRGAGAAA------------------LAHHLHCLDRMWPEALAVPRESAHRMAR-AAQRIEALTALEVRLPESPDHDP-----LRARLTAHRDTLRKVVTENAARLGAETPAAFSRRLHNYWNLWRGEPQD 277
            RR  LE +D     L  E  R  DAA  AA    + +R L++L+R  LG   Y ++    DRLL+     AGR L +A       +TL++LA     L + D+     LIA   A+ + R    P     +A V      L+ R   W L   G+  + A    A  +   GR A A A                  L H L  L  +WP  L    + AHR+A       +    LE     +P+        L   +   R TL+++      +L AETP A+ RRLH YW  W+GE Q+
Sbjct:   16 RRIVLEQVDEALTHLADEFDRDPDAAVHAARKQFKRLRALLRLIRCELGSACYRQE----DRLLQE----AGRTLSQARDAHVLVKTLTKLARE---LDLSDD----GLIASLQARLEERSAAVPLDREVIAGVVVSLVGLQQRLEDWPLRHEGWPLIEAG---ALWVYRQGRRAFACAYDQPSAEHFHTWRKRVKDLWHQLELLTPLWPPVLKPLADEAHRLADYLGDEHDLSVLLETLQTFTPEITTGKGALLLETIEKQRQTLQQLARPLGLKLYAETPRAYRRRLHGYWQAWKGEAQE 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103066.445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7X0H8X3_9BACT5.210e-2133.68Uncharacterized protein n=1 Tax=Algisphaera agaril... [more]
UPI00167AE9E07.480e-529.15CHAD domain-containing protein n=1 Tax=Lysobacter ... [more]
U5QQZ3_9CYAN7.940e-529.47CHAD domain-containing protein n=1 Tax=Gloeobacter... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103066contigP-canaliculata_contig103066:111..968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103066.445.1mRNA_P-canaliculata_contig103066.445.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig103066 111..968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig103066.445.1 ID=prot_P-canaliculata_contig103066.445.1|Name=mRNA_P-canaliculata_contig103066.445.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=286bp
MPRARLKRRESLIKFARRAALEALDRTAARLEPARKADAAAAAAALREMR
FLVQLLREPLGPVAYARDQAALDRLLRRLDPAAGRGLIEAAQTLSRLADT
KPALSVPDECTPRALIAAQRKGRGRREPARLRTLADVAELRLRARHWHLS
ETGFASLAAPLRRACRLAASGRGAGAAALAHHLHCLDRMWPEALAVPRES
AHRMARAAQRIEALTALEVRLPESPDHDPLRARLTAHRDTLRKVVTENAA
RLGAETPAAFSRRLHNYWNLWRGEPQDPLPKADDPS
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