prot_P-canaliculata_contig102560.396.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102560.396.1
Unique Nameprot_P-canaliculata_contig102560.396.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length144
Homology
BLAST of mRNA_P-canaliculata_contig102560.396.1 vs. uniprot
Match: A0A7Y3RMH4_9PROT (Peptidase A2 domain-containing protein n=1 Tax=Parvularcula mediterranea TaxID=2732508 RepID=A0A7Y3RMH4_9PROT)

HSP 1 Score: 120 bits (302), Expect = 2.720e-30
Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    1 GAVSVPYRISETGRFLLDVSINDGPPRAFSVDTGATISVIYSDYAKASDLPVSDKTVFVRGLNSQGARPIIEDVSLAVGSQAFPLAFVVLLDSPKLGDEAIGLLGGDIFHGQIVLFDTASSRVTFVPRESVDRAAFAGWNRIRL 144
            GA+SVPY +SETG F++DV +N GPPR F VD+GA+ S IY     A  L  + ++V VRGL S G RP +E V+  +G+   P+  +V L       + +GL+G D+    +V+FD  +   TF+P  SV   +F GW    L
Sbjct:   33 GAISVPYELSETGLFVVDVGVNGGPPRPFFVDSGASTSAIYDRNLSAFGLSETGESVVVRGLVSTGERPKVEGVTFTIGALTTPVQSIVSLKPSTASFDVVGLIGLDVLSDYLVMFDVETKLATFIPASSVSPRSFVGWRLTEL 176          
BLAST of mRNA_P-canaliculata_contig102560.396.1 vs. uniprot
Match: UPI00199F5A11 (Uncharacterized protein n=2 Tax=Sphingomonas metalli TaxID=1779358 RepID=UPI00199F5A11)

HSP 1 Score: 63.2 bits (152), Expect = 5.620e-9
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 0
Query:    4 SVPYRISETGRFLLDVSINDGPPRAFSVDTGATISVIYSDYAKASDLPVSDKTVFVRGLNSQGARPIIEDVSLAVG-SQAFPLAFVVLLDSPKLGDEAIGLLGGDIFHGQIVLFDTASSRVTF 125
            + P  I+ +G  +  VS+++G P AF +DTGA  S +Y  +A++  LP + +   + G       P+ +  ++A+  +++ PL  V L D P   D A G+LG D+  G +V FD A  RV F
Sbjct:   27 AAPLTIAASGHPVAPVSVDEGRPAAFIIDTGAEGSAVYRWFAESRHLPEAGEER-LDGQTGAATLPMRQVQTMAIDRARSRPLQLVELADQPDRRDIA-GVLGLDVMRGSLVEFDFAHRRVLF 147          
BLAST of mRNA_P-canaliculata_contig102560.396.1 vs. uniprot
Match: A0A357LEK2_9PROT (Peptidase A2 domain-containing protein n=2 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A357LEK2_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 1.290e-7
Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = 0
Query:    6 PYRISETGRFLLDVSINDGPPRAFSVDTGATISVIYSDYAKASDLPVSDKTVFVRGLNSQGARPIIEDVSLAVGSQAFPLAF----VVLLDSPKLGDEAIGLLGGDIFHGQIVLFDTASSRVTFVPRESVDRAAFA 137
            PY++S+ G   +DV++N   P  F VDTGAT+++++ ++A+ ++LP ++  V +R L+  GA+ I E   L   +    LA     VVL D         G++G DI     +  D     + F     + +A  A
Sbjct:   28 PYKLSDEGAITIDVTVNGRGPYPFIVDTGATLTIVFDNFARHANLPRAEG-VSLRVLSISGAK-IFEPYELGALAAGTVLAERQIGVVLPDWDAPRKTPAGIIGLDILENFAIALDAKKQTIAFYRGAGLPKALTA 161          
BLAST of mRNA_P-canaliculata_contig102560.396.1 vs. uniprot
Match: U5QGB6_9CYAN (Peptidase A2 domain-containing protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QGB6_9CYAN)

HSP 1 Score: 51.6 bits (122), Expect = 2.460e-5
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    2 AVSVPYRISETGRFLLDVSINDGPPRAFSVDTGATISVIYSDYAKASDLPVSDKTVFVRGLNS 64
            AVS+P+  S  G  ++   +N GPP AF VDTGA +SV+   Y +   LP+  + V + G+ S
Sbjct:   26 AVSIPFE-SVAGLIVVQARVNQGPPAAFIVDTGANVSVLSDRYVRERRLPLRSRRVQLSGIGS 87          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102560.396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7Y3RMH4_9PROT2.720e-3040.97Peptidase A2 domain-containing protein n=1 Tax=Par... [more]
UPI00199F5A115.620e-933.33Uncharacterized protein n=2 Tax=Sphingomonas metal... [more]
A0A357LEK2_9PROT1.290e-729.41Peptidase A2 domain-containing protein n=2 Tax=Par... [more]
U5QGB6_9CYAN2.460e-539.68Peptidase A2 domain-containing protein n=1 Tax=Glo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10coord: 3..132
e-value: 2.1E-13
score: 52.1
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 7..109
NoneNo IPR availablePFAMPF13650Asp_protease_2coord: 18..107
e-value: 1.4E-9
score: 38.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102560contigP-canaliculata_contig102560:562..993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102560.396.1mRNA_P-canaliculata_contig102560.396.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102560 562..993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102560.396.1 ID=prot_P-canaliculata_contig102560.396.1|Name=mRNA_P-canaliculata_contig102560.396.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp
GAVSVPYRISETGRFLLDVSINDGPPRAFSVDTGATISVIYSDYAKASDL
PVSDKTVFVRGLNSQGARPIIEDVSLAVGSQAFPLAFVVLLDSPKLGDEA
IGLLGGDIFHGQIVLFDTASSRVTFVPRESVDRAAFAGWNRIRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf