prot_P-canaliculata_contig102533.393.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102533.393.1
Unique Nameprot_P-canaliculata_contig102533.393.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length88
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig102533.393.1 vs. uniprot
Match: A0A7X0LLR1_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0LLR1_9BACT)

HSP 1 Score: 114 bits (286), Expect = 3.280e-29
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0 
Query:    4 KVRTKECVACYTPHVTIHRVKITYRKQWDFICDICWADRCVDNPHYEYGGLWMSGRVMPPESELYAEWLAKRKQR--SKGQP 83
            K RTK+CV CYTP  TIHRV++ +RKQW FICDICW  RCVDNPHYE+GG W++GR++ PES+L  E  AK K +  SK +P
Sbjct:  150 KPRTKQCVNCYTPCTTIHRVRLDHRKQWVFICDICWPSRCVDNPHYEFGGTWVTGRIVKPESQLRDEARAKHKDKKQSKDKP 231
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102533.393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X0LLR1_9BACT3.280e-2962.20Uncharacterized protein n=1 Tax=Algisphaera agaril... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102533contigP-canaliculata_contig102533:68..331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102533.393.1mRNA_P-canaliculata_contig102533.393.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102533 68..331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102533.393.1 ID=prot_P-canaliculata_contig102533.393.1|Name=mRNA_P-canaliculata_contig102533.393.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=88bp
KKRKVRTKECVACYTPHVTIHRVKITYRKQWDFICDICWADRCVDNPHYE
YGGLWMSGRVMPPESELYAEWLAKRKQRSKGQPSRSES
back to top