prot_P-canaliculata_contig10238.376.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10238.376.1
Unique Nameprot_P-canaliculata_contig10238.376.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length120
Homology
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 5.800e-39
Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0
Query:   36 ATAPKPSHETVKTRKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            A+A KP  +  K RKKG+SVACPIAYGSLAFLLERKKQSE++THKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR
Sbjct:    2 ASASKPPADVPKIRKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 79          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN)

HSP 1 Score: 94.4 bits (233), Expect = 2.090e-22
Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0
Query:   49 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            RKK  +V CP+ YGS+AF L RK   EY THKWTLFVRGP+GED+ YFV KVVF LHPSFA+  R
Sbjct:    1 RKKNTAVCCPLVYGSVAFWLGRKAD-EYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVR 64          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.690e-20
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   49 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            R K  +V CP+ YGSLAF L RK   E+ THKWTLFVRGP+GED+ YFV KVVF LHPSFA+  R
Sbjct:   36 RVKDAAVCCPLVYGSLAFWLGRKAD-EFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVR 99          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A6U3QEB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QEB4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.010e-18
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   55 VACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            + CPI YGS+A  L RK    + TH+WTLFVRGPNGED++YF+SKVVFTLHPSFA+  R
Sbjct:   11 IHCPIVYGSIAHWLGRKADEAH-THRWTLFVRGPNGEDLTYFLSKVVFTLHPSFAQPVR 68          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.870e-17
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   49 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            R+K   V CPI YGS+AF +  KK  E+ TH+WTL+VRGPN ED+ YF+ KVVF LH SFA   R
Sbjct:   12 RRKNTLVCCPIVYGSIAFWMG-KKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPER 75          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.220e-16
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0
Query:   49 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSE 117
            R  G++V CP+ +G +AFLL  K   E  TH WTL+VRG +GEDISYFVSKVVFTLH SF   TR  +E
Sbjct:   11 RMSGVTVCCPVVFGCVAFLLG-KDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTE 78          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A8J9X9H2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X9H2_PHATR)

HSP 1 Score: 77.4 bits (189), Expect = 3.550e-16
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   49 RKKGISVAC-PIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSE 117
            R+   + AC PI YGS+AF L  KK  EY TH+WTL +RGPN ED+S  +SKVVF LHPSF++ TR  +E
Sbjct:    1 RRMEHTTACLPIVYGSVAFYLG-KKADEYNTHQWTLHLRGPNNEDLSPVISKVVFHLHPSFSQPTRELTE 69          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A7S3GNA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GNA1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-15
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   57 CPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            CPI YGS+A  L  KK  EY TH+W L++RGPN ED+S FV KV FTLHPSFAE  R
Sbjct:    2 CPIVYGSVAVHLG-KKSEEYSTHRWKLYIRGPNNEDLSTFVEKVAFTLHPSFAEPVR 57          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: C1EEG0_MICCC (YEATS domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEG0_MICCC)

HSP 1 Score: 77.8 bits (190), Expect = 3.490e-15
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   49 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 113
            RKK   +  PI YG+ A+ L  KK  EY +HKWT+++RGP  ED+S+ +SKVVF LHPSF EA R
Sbjct:   20 RKKDTELVVPICYGTCAYWLG-KKADEYHSHKWTVYLRGPENEDLSHVISKVVFNLHPSFKEAQR 83          
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Match: A0A1Z5KJV7_FISSO (YEATS domain-containing protein 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJV7_FISSO)

HSP 1 Score: 78.2 bits (191), Expect = 5.570e-15
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   47 KTRKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSE 117
            +TR++   V  P+A GS+AF L  K  ++  TH+WTL+VRGP+GED+S  + KV+F LHPSFA+ TR  +E
Sbjct:   11 ETRRENTIVCLPVATGSIAFYLGNKSDTQ--THEWTLYVRGPSGEDLSVVLEKVIFQLHPSFAQPTRELTE 79          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10238.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWH7_ECTSI5.800e-3985.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0Y5R3_AURAN2.090e-2267.69Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3ZZU1_9STRA8.690e-2066.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U3QEB4_9STRA2.010e-1866.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9Y9J6_9STRA5.870e-1758.46Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835ZJW2_9STRA1.220e-1659.42Yeats family-domain-containing protein n=1 Tax=Tri... [more]
A0A8J9X9H2_PHATR3.550e-1657.14Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S3GNA1_9STRA1.100e-1564.91Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
C1EEG0_MICCC3.490e-1555.38YEATS domain-containing protein n=1 Tax=Micromonas... [more]
A0A1Z5KJV7_FISSO5.570e-1550.70YEATS domain-containing protein 4 n=2 Tax=Fistulif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005033YEATSPFAMPF03366YEATScoord: 78..113
e-value: 8.3E-11
score: 41.7
IPR005033YEATSPANTHERPTHR23195YEATS DOMAINcoord: 48..113
IPR005033YEATSPROSITEPS51037YEATScoord: 56..119
score: 12.076
IPR038704YEATS superfamilyGENE3D2.60.40.1970coord: 50..118
e-value: 4.2E-19
score: 71.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10238contigP-canaliculata_contig10238:2553..4297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10238.376.1mRNA_P-canaliculata_contig10238.376.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10238 2553..4545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10238.376.1 ID=prot_P-canaliculata_contig10238.376.1|Name=mRNA_P-canaliculata_contig10238.376.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=120bp
SAQATNGTAGDGTAGTGCTSQGSEANVGGSAGGTCATAPKPSHETVKTRK
KGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKV
VFTLHPSFAEATRGKSETT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005033YEATS
IPR038704YEAST_sf