prot_P-canaliculata_contig102364.373.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102364.373.1
Unique Nameprot_P-canaliculata_contig102364.373.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length326
Homology
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A3A0C6W3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0C6W3_9BACT)

HSP 1 Score: 106 bits (265), Expect = 7.470e-22
Identity = 79/173 (45.66%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    2 DTDCDGVPDYKDT---------DSDGDGIAD--------ASDNCRIDANGS----QFDFDFDGVGNSCDASPANASLCGDSDGDSCDDCA--NGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDGLDTDSDGACDAGD 151
            D D DGVPD +D          DSD DG  D        ASD    D +G+      D D D V +  DA P NA +CGDSDGD CDDC+   G     NDG D D+DG CDAGD         D  D  P D F C+D+D D CDDC + G P P  DGLD D+DG CD GD
Sbjct:  273 DDDNDGVPDGEDEAPLNQFACRDSDADGCDDCTSGVENAASDGLDTDGDGTCDVGDPDDDNDTVLDGADADPYNAFVCGDSDGDGCDDCSVTGGPPSTTNDGPDFDNDGFCDAGDLDDDMDGVSDDMDNDPFDPFVCRDADADGCDDCGILGSPDPSIDGLDFDADGLCDDGD 445          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: X0XNF9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XNF9_9ZZZZ)

HSP 1 Score: 100 bits (249), Expect = 1.240e-21
Identity = 60/115 (52.17%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   38 DFDFDGVGNSCDASPANASLCGDSDGDSCDDCAN-GSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDGLDTDSDGACDAGD 151
            D D D V +  D  P +  +C D D DSCDDC+  G  D ++DGTDTDSDG C+ GD        LDG D  PLD   CQD D D+CDDCSV G+P   +DG DTDSDG C+ GD
Sbjct:   22 DTDGDTVLDGVDTDPLDPLVCQDLDSDSCDDCSVLGLPDTSDDGTDTDSDGLCNTGDPDDDNDTVLDGVDTDPLDPLVCQDLDSDTCDDCSVLGLPDTSDDGTDTDSDGLCNTGD 136          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A8B2HLM9_9ARCH (HYR domain-containing protein n=1 Tax=Nitrosopumilus sp. K4 TaxID=2795383 RepID=A0A8B2HLM9_9ARCH)

HSP 1 Score: 100 bits (249), Expect = 1.100e-19
Identity = 68/133 (51.13%), Postives = 83/133 (62.41%), Query Frame = 0
Query:   32 ANGSQFDFDFDGVGNSCDAS-------------PANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDGLDTDSDGACDAGD 151
            AN  Q + D D  G++CD               P +A+ CGD+D D+CDDC +G+FD +NDG D DSD  CD GDX  XXXXX D SD  PL+ F C DSD DSCDDCSV G    ++DG DTD+DG C+ GD
Sbjct:  371 ANADQANIDGDQHGDACDPDSDNDTIPDVDDPYPLDATACGDADLDACDDCVSGTFDTSNDGPDYDSDLICDIGDXDDXXXXXPDPSDLDPLNQFICTDSDADSCDDCSVLGYANANDDGTDTDTDGLCNVGD 503          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A1H4PV61_9FLAO (C-terminal domain of CHU protein family protein n=8 Tax=Maribacter TaxID=252356 RepID=A0A1H4PV61_9FLAO)

HSP 1 Score: 95.5 bits (236), Expect = 6.840e-18
Identity = 68/159 (42.77%), Postives = 82/159 (51.57%), Query Frame = 0
Query:    1 VDTDCDGVPDYKDTDSDGDGIADASDNCRIDANGSQFDFDFDGVGNSCDASPANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQ--------PDNDGLDTDSDGACDAGD 151
            +DTD DG+ D  DTD D DG+   +DN  +D +  Q   D DG         +           S D  A  +FDPANDG DTD DG CD GD        LD +D +PLD  +CQD+DGD CDDCS              P NDG+DTD DG CD+GD
Sbjct:  913 LDTDGDGICDTGDTDDDNDGVLXVNDNAPLDPSSCQ---DADGXXXXXXXXTS-----------STDFSAGANFDPANDGLDTDGDGICDTGDTDDDNDGVLDVNDNAPLDPSSCQDADGDGCDDCSATSSTDFSVGNNFDPSNDGIDTDGDGICDSGD 1057          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: UPI0015BAE525 (T9SS type A sorting domain-containing protein n=1 Tax=Winogradskyella schleiferi TaxID=2686078 RepID=UPI0015BAE525)

HSP 1 Score: 94.4 bits (233), Expect = 1.230e-17
Identity = 63/130 (48.46%), Postives = 76/130 (58.46%), Query Frame = 0
Query:    5 CDGVP-DYKD------TDSDGDGIADASDNCRIDANGSQFDFDFDGVGNSCDASPANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCS 127
            CDGV  D  D      TD+DGDG AD  D           D D DGV +  D+SP N  +C D+DGD CDDC++G+ D ANDGTDTD DG C+AGD        +D  D  PL+ F C+D+D D CDDCS
Sbjct:  364 CDGVDNDLNDGVDEGFTDTDGDGKADCID----------LDDDNDGVADGDDSSPLNQFVCRDADGDGCDDCSSGTDDAANDGTDTDGDGLCNAGDIDDDNDGVVDVDDLEPLNPFICRDADNDGCDDCS 483          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A1I6IQ01_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=6 Tax=Maribacter TaxID=252356 RepID=A0A1I6IQ01_9FLAO)

HSP 1 Score: 93.6 bits (231), Expect = 3.030e-17
Identity = 66/132 (50.00%), Postives = 75/132 (56.82%), Query Frame = 0
Query:   38 DFDFDGVGNSCDASPANASLCGDSDGDSCDDCA---------NGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQ--------PDNDGLDTDSDGACDAGDV 152
            D D DGV +  D +P N S C D DGD CDDC+           +FDPANDGTDTD DG CDA D   XXXXX     A+PL+   CQD DGD CDDCS              P NDG+DTD DG C++GD 
Sbjct: 1099 DDDNDGVLDGDDNAPLNPSSCQDLDGDGCDDCSATASTDFSVGNNFDPANDGTDTDGDGICDASDPDDXXXXXXXXXXAAPLNPSICQDLDGDGCDDCSATASTDFSAGNNFDPSNDGIDTDGDGICNSGDA 1230          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: UPI0012FFFE8A (Ig-like domain-containing protein n=1 Tax=Arenibacter hampyeongensis TaxID=1028743 RepID=UPI0012FFFE8A)

HSP 1 Score: 93.6 bits (231), Expect = 3.040e-17
Identity = 74/155 (47.74%), Postives = 82/155 (52.90%), Query Frame = 0
Query:   14 TDSDGDGIADASDNCRIDANGSQFDFDFDGVGNSCDASPANASLCGDSDGDSCDDCA---------NGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQ--------PDNDGLDTDSDGACDAGD 151
            TD+DGDGI DASD+          D           A+P + S+C D DGD CDDC+           +FDPANDGTDTD DG CDA D  XXXXXX     A+PLD   CQD D D CDDCS              P NDG DTD DG CDA D
Sbjct: 1009 TDTDGDGICDASDS----------DXXXXXXXXXXXAAPLDPSICQDLDGDGCDDCSATSNTDFTTGNNFDPANDGTDTDGDGICDASDSDXXXXXXXXXXXAAPLDPSICQDVDSDGCDDCSATSNTDFTAGNNFDPANDGTDTDGDGICDASD 1153          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A2E1X6J3_9BACT (Peptidase_S8 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1X6J3_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 9.350e-17
Identity = 69/175 (39.43%), Postives = 89/175 (50.86%), Query Frame = 0
Query:    1 VDTDCDGVPDYKDTDSDGDGIADASDNCRIDANGSQ---------------------FDFDFDGVGNSCDA----------------SPANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDG 138
            +DTD DG+ D  D D D DG+ D+ D+  +D N  +                        D DG+   CDA                +P + ++C D DGDSCDDC++G  +PA DGTDTDSDG CDAGD        +DG D +PLD   C+D D D CDDCS +G+  P NDG
Sbjct: 1215 IDTDSDGLIDPCDPDDDNDGVVDSEDDAPLDPNVCRDLXXXXXXXXXXXXXXXXXXXXXXDSDGL---CDAGDPDDDNXXVVXGEDNAPLDPNVCRDLDGDSCDDCSSGIDNPAGDGTDTDSDGLCDAGDPDDDNDGVVDGEDNAPLDNTICRDVDNDGCDDCS-SGVDDPANDG 1385          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A661FK90_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FK90_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 1.860e-16
Identity = 70/178 (39.33%), Postives = 85/178 (47.75%), Query Frame = 0
Query:   15 DSDGDGIADASDNCRIDANGSQFDFDFDGVGNS------CDASPANA-----SLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXL-----------------------DGSDASPLDAFACQDSDGDSCDDCSVA-------GMPQPDNDGLDTDSDGACDAGD 151
            DSDGDGI DA D C         D   DG+G+       CDAS  +      ++CGD+DGD C+DC+ G FDPA DG+D DSDG CD GD                                DG+D +P D   C D D D+CDDC++        G   P NDG D + DG CDAGD
Sbjct:  629 DSDGDGIGDACDRCN--------DVVGDGLGDGRLGNADCDASATDTDDTDPTVCGDTDGDGCEDCSGGFFDPAADGSDLDSDGICDLGDNCPVDANSSQDDNDLDGAGDACDADDDNDGVDDGADPAPFDPDLCGDVDADTCDDCAIGTDDLGPLGDSDPANDGADFEGDGLCDAGD 798          
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Match: A0A7W1XX02_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1XX02_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 5.280e-16
Identity = 62/137 (45.26%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   15 DSDGDGIADASDNCRIDANGSQFDFDFDGVGNSCDASPANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDXXXXXXXXLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDGLDTDSDGACDAGD 151
            D D DG+ D +D           D D DGV ++ D  P N   C D D D CDDCANG+ DP NDG DTD+DG C+  D         D  D+ PLD F C D D D CDDC+  G+    +DG DTD DG CD  D
Sbjct:  522 DFDADGLCDEADP----------DDDNDGVSDAEDLDPLNPLSCRDVDLDGCDDCANGTDDPLNDGVDTDADGVCNLQDEDDDNDGIADLEDSHPLDPFLCGDVDMDGCDDCTT-GVSDTTSDGTDTDGDGICDLAD 647          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102364.373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3A0C6W3_9BACT7.470e-2245.66Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
X0XNF9_9ZZZZ1.240e-2152.17Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A8B2HLM9_9ARCH1.100e-1951.13HYR domain-containing protein n=1 Tax=Nitrosopumil... [more]
A0A1H4PV61_9FLAO6.840e-1842.77C-terminal domain of CHU protein family protein n=... [more]
UPI0015BAE5251.230e-1748.46T9SS type A sorting domain-containing protein n=1 ... [more]
A0A1I6IQ01_9FLAO3.030e-1750.00Gliding motility-associated C-terminal domain-cont... [more]
UPI0012FFFE8A3.040e-1747.74Ig-like domain-containing protein n=1 Tax=Arenibac... [more]
A0A2E1X6J3_9BACT9.350e-1739.43Peptidase_S8 domain-containing protein n=1 Tax=Pla... [more]
A0A661FK90_9GAMM1.860e-1639.33Uncharacterized protein (Fragment) n=1 Tax=Gammapr... [more]
A0A7W1XX02_9BACT5.280e-1645.26Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028974TSP type-3 repeatGENE3D4.10.1080.10coord: 1..58
e-value: 1.1E-9
score: 40.3
IPR028974TSP type-3 repeatSUPERFAMILY103647TSP type-3 repeatcoord: 2..68
NoneNo IPR availablePANTHERPTHR10199:SF100THROMBOSPONDIN, ISOFORM Acoord: 2..109
NoneNo IPR availablePANTHERPTHR10199THROMBOSPONDINcoord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102364contigP-canaliculata_contig102364:19..996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102364.373.1mRNA_P-canaliculata_contig102364.373.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102364 19..996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102364.373.1 ID=prot_P-canaliculata_contig102364.373.1|Name=mRNA_P-canaliculata_contig102364.373.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=326bp
VDTDCDGVPDYKDTDSDGDGIADASDNCRIDANGSQFDFDFDGVGNSCDA
SPANASLCGDSDGDSCDDCANGSFDPANDGTDTDSDGQCDAGDVDDDNDG
VLDGSDASPLDAFACQDSDGDSCDDCSVAGMPQPDNDGLDTDSDGACDAG
DVDDDNDGISDGADPDAADPGVCGDLDGDSCDDCSVGNDGFGPGVDSLPN
DDGLDTDSDGACDAGDTDDDNDGVSDGPDSDPLDPFLCQDTDSDSCDDCS
ASGTSMPANDGLDSDGDGACDAGDADDDNDGVADGSDSAPLNNFQCQDSD
SDTCDDCAVAGSSQPSNDGLDTDGDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028974TSP_type-3_rpt