prot_P-canaliculata_contig10230.364.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10230.364.1
Unique Nameprot_P-canaliculata_contig10230.364.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length170
Homology
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: D8LRD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD9_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 3.690e-70
Identity = 110/169 (65.09%), Postives = 125/169 (73.96%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFYAVGGAVICNACPGRTARAV-GKRCRDSRGCC 168
            CP GTF W+YGESSR SC PCKAGYY P   +A PS  +T + CGNP +FCP GSVEP  V  GFYSVGGG  GTTRVSQVLCE G YC++  +  CP GT+G+S GL DEGC+GVCPPGAAC   TVDP  CEEG+YA GGAV CNACPG+    + G+RCR SR CC
Sbjct:  836 CPAGTFQWKYGESSRGSCLPCKAGYYCPPGESASPSRDATLVACGNPTVFCPEGSVEPVPVRAGFYSVGGGSEGTTRVSQVLCEAGYYCQDAARKLCPAGTYGSSAGLRDEGCTGVCPPGAACAEGTVDPTPCEEGYYATGGAVACNACPGKRVTGLEGERCRTSRSCC 1004          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A6H5JG60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG60_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 9.720e-61
Identity = 110/215 (51.16%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCK---------------AGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQ-------------------------------VLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFYAVGGAVICNACPG-RTARAVGKRCRDSRGCC 168
            CP GTF W+YGESSR SC PCK               AGYY P   +A PS+ +  + CGNP +FCP GSVEP  V  GFYSVGGG  G TRVSQ                               VLCE G YC++  +  CP GT+G+S GL DEGC+GVCPPGAAC   TVDP  CEEG+YA GGAV CNACPG R A   G+RCR SR CC
Sbjct:  709 CPAGTFQWKYGESSRASCLPCKPPNPRLLPDVAMNTKAGYYCPPGESASPSLAAALVACGNPTVFCPEGSVEPVPVRAGFYSVGGGSEGNTRVSQASTTQLAPLLLRCPTRCLARHCLIISNSRSKVLCEAGYYCQDAARKLCPAGTYGSSAGLRDEGCTGVCPPGAACAEGTVDPTPCEEGYYATGGAVACNACPGKRVAGLEGERCRTSRSCC 923          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A835Z6D3_9STRA (TNFR-Cys domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.070e-39
Identity = 83/194 (42.78%), Postives = 101/194 (52.06%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTV---------------GVGFYSVG---GGLN--GTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFYAVGGAVICNACPGRTARA------VGKRCRDSRGCC 168
            CPPGT+ W+YG    + C PC AGY+ P    A P++   P ECG P ++CP GS EP  V               GVG+YS G    GL+  G TR +Q  CEPG YCR G++  CP GT+G + GL+   CSG CP G ACP  +  P  C  G YA  G+  C  CP   AR          RCR SR CC
Sbjct:  363 CPPGTYQWRYGAHDVSDCAPCPAGYFCPSYP-APPTVDPAPFECGGPDVYCPEGSSEPLPVKRRAVSQVPEMLHGCGVGYYSTGVAREGLDDGGATRSAQARCEPGYYCRGGIRTECPAGTYGATTGLNTPRCSGWCPAGHACPRGSAQPSACAAGRYAPQGSPDCYDCP-LDARPPXXXXLAAPRCRTSRLCC 554          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A482UHX1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UHX1_9ARCH)

HSP 1 Score: 113 bits (283), Expect = 2.120e-26
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGG-----GL-NGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACP 124
            CPPGT+    G SS   C PC  G+Y P   ++    V+T ++CG+  ++CP GS  P +   G+Y+VGG     GL   TTRV++V CEPG+YC  G++  CP GT+G +  L+   CSG C  G  CP
Sbjct:  203 CPPGTYSDVLGLSSAAGCLPCAPGFYCPYTNHS----VATAVQCGSAAVYCPLGSATPVSASPGYYTVGGYERQLGLPESTTRVTEVACEPGTYCERGIRRACPAGTYGATARLNSSACSGECERGHFCP 328          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: K3WNJ6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNJ6_GLOUD)

HSP 1 Score: 103 bits (256), Expect = 2.140e-22
Identity = 53/129 (41.09%), Postives = 67/129 (51.94%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSC-----TPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACP 124
            CP G +  + GE+S  S      + C AG           S+     ECG     C  GS  P  V  G+YS+GGG + TTR  Q  CEPG +C++G+K+ CP GTFG + GLHD  CSG C  G  CP
Sbjct:  813 CPAGRYGDKVGETSPQSLFVRIISKC-AGXXXXXXXXXSGSVSPAERECGGADRMCRTGSSVPAVVSQGYYSIGGGASNTTRFHQRPCEPGYFCKDGIKYQCPEGTFGATSGLHDPMCSGYCAAGYCCP 940          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: D7FIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 2.840e-22
Identity = 63/151 (41.72%), Postives = 75/151 (49.67%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSG-----VCPPGAACP----GETVDPITCEEGFYAVGG 142
            CPPGT    +G +S +   P  AGYY      +G +  S    CG PG FCP  S  P  VG G Y+VGG  +   RV+Q  C  GSYC+EG+ FPCP GTFG+  GL    CSG        P    P    G+ V  I C  G Y V G
Sbjct:  632 CPPGTVGSSHGLASPSCSGPSLAGYY------SGAAEASLGERCGGPGWFCPEASSSPSEVGAGNYTVGGPPD--RRVAQETCPAGSYCQEGVLFPCPPGTFGSLPGLSSSACSGPXXXXXXXPSGTSPSISTGKEVIGIACPAGRYGVEG 774          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A2P4YK08_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK08_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.100e-22
Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFYAV 140
            CP G +  Q GE+S      C  GY  P  +++     ST LECG     C +GS  P+ V  G+YS+G     TTR  Q  CE GS+C +G+K+PCP GTFG + GL    CSG C PG  CP  ++     E G  +V
Sbjct:  541 CPVGRYGDQSGETSPLCAGLCSRGYRCPEGSSS-----STQLECGGSNFVCGSGSPAPQLVHPGYYSIG--PTATTRFFQQPCELGSFCIDGVKYPCPAGTFGATSGLSTAACSGKCAPGYYCPPSSISRTQNECGSSSV 673          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: K0SWJ8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SWJ8_THAOC)

HSP 1 Score: 100 bits (250), Expect = 1.280e-21
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 0
Query:    1 CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVD-------------------PITCEEGFY 138
            CP G+F  +  E+       C+ G++       G S   T   CG P ++CP GS  P+ V  G+Y+     N   + +Q+LC PGSYCREGL+ PCP   FG+S G HD  C GVC PG  CP ++                     PI  ++G+Y
Sbjct:  380 CPRGSFGDRQKETYHQCSGLCEPGFF----CEEG-SPTPTQYACGGPDVYCPRGSSAPQYVREGYYTP---ENEEHKTTQILCPPGSYCREGLRIPCPASRFGSSSGQHDAHCDGVCEPGYFCPSDSTSSTQTPCGNSSVYCPEASATPIIVDQGYY 528          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A6G0XDF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDF0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.540e-21
Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = 0
Query:    1 CPPGTF----------LWQYGESSRNSCTPCKA----GYY------FPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFY 138
            CPPG++          L +YG  S  + + C      G+Y       P+  +   S++   +EC NP  +CPA +  P  V  GFY++        R  Q+ CEPG+YC  G++ PCP GTFGN+ GL D  CSG+C PG  CP  +   + C +  Y
Sbjct:  350 CPPGSYCIHGQIFACPLGRYGNESGLALSTCSGVCPQGHYCPVGTVHPVSDSPQVSLIFFQVECVNPATYCPAEASAPVAVTAGFYTL---PKDGPRSKQLQCEPGTYCVHGIQAPCPSGTFGNTSGLTDASCSGLCSPGYNCPTGSSLGLECGDSRY 504          
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Match: A0A7S2DMF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMF6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.340e-20
Identity = 57/149 (38.26%), Postives = 71/149 (47.65%), Query Frame = 0
Query:    1 CPPGTFL----------WQYGESS---RNSCTP-CKAGYYFPLQANAGPSIVSTPLECGNPGLFCPAGSVEPKTVGVGFYSVGGG-----------LNGTTRVSQVLCEPGSYCREGLKFPCPRGTFGNSWGLHDEGCSGVCPPGAACP 124
            CPPG +            +YG S+      C   C AGYY P       S+     +CGN  ++CP GS  P     GFY+V  G           LN TT  +Q LCEPG +C EG+K+ CP G +G S+GL    CSG C PG  CP
Sbjct:  101 CPPGHYCIGGVRQECEAGRYGSSAGLYHADCDGLCFAGYYCPRA-----SVAMDQRQCGNASVYCPTGSARPIIALPGFYTVHTGPYQGRLMLSDPLN-TTTSAQALCEPGHWCAEGIKYQCPAGRYGLSYGLSSRECSGPCAPGYRCP 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10230.364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRD9_ECTSI3.690e-7065.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG60_9PHAE9.720e-6151.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6D3_9STRA3.070e-3942.78TNFR-Cys domain-containing protein n=1 Tax=Tribone... [more]
A0A482UHX1_9ARCH2.120e-2642.31Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
K3WNJ6_GLOUD2.140e-2241.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D7FIP6_ECTSI2.840e-2241.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P4YK08_9STRA7.100e-2240.71Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
K0SWJ8_THAOC1.280e-2135.03Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A6G0XDF0_9STRA2.540e-2134.81Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A7S2DMF6_9STRA1.340e-2038.26Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46104FAMILY NOT NAMEDcoord: 1..165
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10230contigP-canaliculata_contig10230:10308..11493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10230.364.1mRNA_P-canaliculata_contig10230.364.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10230 10308..11493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10230.364.1 ID=prot_P-canaliculata_contig10230.364.1|Name=mRNA_P-canaliculata_contig10230.364.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=170bp
CPPGTFLWQYGESSRNSCTPCKAGYYFPLQANAGPSIVSTPLECGNPGLF
CPAGSVEPKTVGVGFYSVGGGLNGTTRVSQVLCEPGSYCREGLKFPCPRG
TFGNSWGLHDEGCSGVCPPGAACPGETVDPITCEEGFYAVGGAVICNACP
GRTARAVGKRCRDSRGCCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009030Growth_fac_rcpt_cys_sf