prot_P-canaliculata_contig10196.288.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10196.288.1
Unique Nameprot_P-canaliculata_contig10196.288.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length82
Homology
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.450e-22
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ + +S PAAL  +L+ + +L+RLGMGWF GVITR++Q RTRHLYD+RV L+ D STRSMKLPL  Y  D  A  G W LL
Sbjct:  557 GFRIQASTPAALDNSLLQRGLLVRLGMGWFGGVITRQSQERTRHLYDYRVHLDLDRSTRSMKLPLEMYKGDPDAVVGSWILL 638          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5KHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.420e-21
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ + +S PAAL   L+ + +L+RLGMGWF G+ITR++Q RTRHLYD+RV L+ D STR MKL L  Y  D  A  G W LL
Sbjct:   27 GFRIQASTPAALDNLLLQRGLLVRLGMGWFGGLITRQSQERTRHLYDYRVHLDLDQSTRGMKLQLEMYKGDPDAVVGSWILL 108          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5KA94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA94_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.300e-21
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ +  + P AL + L+ + +L+RLGMGWF G+IT++ Q  TRHLYD+ V LE D STR MKLPL KYS D  AA G W LL
Sbjct:   42 GFRIQDAKPVALGRLLLRRGVLVRLGMGWFGGLITQQYQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLL 123          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5KHK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK5_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.890e-20
Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPW 79
            G+ +  + P AL + L+ + +L RLGMGWFRG+IT+++Q  TRHLYD+ + LE D STR MKLPL KYS D  AA G W
Sbjct:   82 GFRIQEAKPVALDRLLLRRGVLARLGMGWFRGLITQQSQKDTRHLYDYCMQLELDQSTRKMKLPLDKYSGDSDAAVGSW 160          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.930e-20
Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ L +S P+AL Q+LV + +L++LG+GWF GVI+R+A   +R  YD+RV L +DGSTRSMKLPL  YS D  A  G W LL
Sbjct: 1885 GFQLQASPPSALDQSLVKRGVLVKLGLGWFGGVISRRAHPASRDEYDYRVVLHSDGSTRSMKLPLESYSTDEDAGVGSWVLL 1966          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5L5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J8_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.480e-20
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ + +  PAA+  +L+ + +L+RLGMGWF GVITRK+Q RTRHLYD+RV L+ D ST SMKLPL  Y     A  G W LL
Sbjct:  272 GFCIQACTPAAIDSSLLQRGVLVRLGMGWFGGVITRKSQERTRHLYDYRVHLDLDQSTSSMKLPLEMYRGVPDAVVGSWILL 353          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5K5W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 5.950e-20
Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPW 79
            G+ +  + P AL + L+ +E+L R+GMGWF G+IT ++Q  TRHLYD+ V LE D STR MK PL KYS D  AA G W
Sbjct:   24 GFRIQEAKPVALDRLLLRREVLFRVGMGWFGGLITEQSQKDTRHLYDYCVQLELDQSTRKMKSPLDKYSGDSDAAVGSW 102          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5JTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC1_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 8.240e-20
Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    2 YSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            + +  + P AL + L+ + +L+RLGMGWF G+IT+++Q  TRHLYD+ V LE D STR+MKLPL KYS D  AA G W LL
Sbjct:  214 FRIQEAKPVALDRLLLRRGVLVRLGMGWFEGLITQQSQKDTRHLYDYSVQLELDQSTRTMKLPLDKYSGDSDAAGGSWVLL 294          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5K2B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B3_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.150e-19
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ + +S PAAL  +L+ + +L+RLGMGW  G+ITR++Q RTRHLYD+RV L+ D STRSMKLPL  Y  D  A    W LL
Sbjct:  126 GFRIQASTPAALDSSLLQRGLLVRLGMGWLGGIITRQSQERTRHLYDYRVHLDLDQSTRSMKLPLEMYR-DPDAVVDSWILL 206          
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Match: A0A6H5JHV4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV4_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.260e-19
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRVFLETDGSTRSMKLPLAKYSVDGAAAEGPWALL 82
            G+ +  + P AL + L+ + +L+RLGMGWF G+IT+++Q  TRHLYD+ V LE D STR MKLPL KYS D  AA G W LL
Sbjct:  599 GFRIQEAKPVALDRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLL 680          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10196.288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXN2_9PHAE4.450e-2258.54C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KHL7_9PHAE1.420e-2154.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA94_9PHAE8.300e-2154.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHK5_9PHAE1.890e-2054.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE1.930e-2054.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L5J8_9PHAE5.480e-2054.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W3_9PHAE5.950e-2053.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC1_9PHAE8.240e-2054.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2B3_9PHAE1.150e-1954.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHV4_9PHAE2.260e-1954.88HTH CENPB-type domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10196contigP-canaliculata_contig10196:2..247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10196.288.1mRNA_P-canaliculata_contig10196.288.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10196 2..247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10196.288.1 ID=prot_P-canaliculata_contig10196.288.1|Name=mRNA_P-canaliculata_contig10196.288.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=82bp
GYSLVSSAPAALTQNLVNQEILLRLGMGWFRGVITRKAQARTRHLYDFRV
FLETDGSTRSMKLPLAKYSVDGAAAEGPWALL
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