prot_P-canaliculata_contig10195.285.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10195.285.1
Unique Nameprot_P-canaliculata_contig10195.285.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length245
Homology
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.510e-72
Identity = 107/179 (59.78%), Postives = 139/179 (77.65%), Query Frame = 0
Query:   66 SDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSRKFVLEQVASGTPIWLLCIYAVSGLVVMTTAISLILVATKRPKQD 244
            SD++ +T+EN+ ETIK+GTWFVKFYTDWC HC++LQPTWEELA +LKGKV VGQVNC+ D +LC RFHV GYPTLVHVHNR+ RVYK KSR K AL+ FA  GY K  A+SALKSPFGP+E+ KA +    + ++KFV+  +  GTP+W++C+ AV+ L      ++ +LV+ KRPK+D
Sbjct:   75 SDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYK-KSRGKEALVAFALNGYKKQVAVSALKSPFGPLENFKALIAREALRAKKFVVSTIEKGTPMWMVCLCAVAVLXXXXXVVASVLVSIKRPKED 252          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A5J4XL76_9CHLO (Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XL76_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 6.290e-23
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   63 TADSDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARL 192
            T   +V  +T  N+ ++  +G W ++F+  WCSHC+ L+ TW+ LA +LKGKV V +V+  ++R L  RFHV+G+PT+ HVH+ + R Y  K R    L+ FA   +    A+   KSP   I  V  R+
Sbjct:   25 TESQNVRSLTDANFDQSTAEGAWLIEFFAPWCSHCRDLEATWDALADELKGKVNVAKVDGTSERGLLGRFHVEGFPTIFHVHDTETRPYTGK-RTMQKLMDFALADWKAEPALPVWKSPTSLIGRVWGRI 153          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A397TX59_9GLOM (Thioredoxin-like protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TX59_9GLOM)

HSP 1 Score: 102 bits (255), Expect = 1.820e-21
Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 0
Query:   68 VVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 140
            V+ + +EN+ E  K G WFVKF+  WC HCK L PTWEEL++ L+ KV VG+V+C T++ +CS+F+++GYPTL
Sbjct:  161 VISLNSENFDELTKYGPWFVKFFAPWCGHCKNLAPTWEELSRKLQNKVNVGEVDCTTEKDICSKFNIQGYPTL 233          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A0G4FAB9_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAB9_VITBC)

HSP 1 Score: 94.4 bits (233), Expect = 6.070e-20
Identity = 50/117 (42.74%), Postives = 78/117 (66.67%), Query Frame = 0
Query:   83 GTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLK-SRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIIL 198
            G WF++FY +WC HC++LQPTWEELA +LKG+V V +V+C+ + +  SRF+++G+PTL+ +  R+ R+Y+ K +R  +AL  FA  GY K+        P  P ES+  +L +  +L
Sbjct:   51 GDWFIEFYANWCGHCQRLQPTWEELAANLKGRVVVAKVDCDANTSTRSRFNIQGFPTLLLL--RQGRMYEYKGARDLAALEAFATGGYKKTPG-----KPVPPPESLLDQLKKEAML 160          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: Q16961_ACACA (Disulfide-like protein n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=Q16961_ACACA)

HSP 1 Score: 95.9 bits (237), Expect = 2.740e-19
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   71 ITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 140
            +T EN+T     G WFVKFY  WC HCK L PTWE+ A +LKGKV + +V+C TD  +C  F V+GYPTL
Sbjct:  167 LTAENFTLATNGGKWFVKFYAPWCGHCKNLAPTWEKAASELKGKVNIAKVDCTTDGFMCQLFGVRGYPTL 236          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: C1E147_MICCC (Thioredoxin domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E147_MICCC)

HSP 1 Score: 92.8 bits (229), Expect = 3.300e-19
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 0
Query:   68 VVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSP 181
            VV++T  ++   + +G   V  Y DWC HC+QL P WEELAK+L+G+V V +VN    R+L  R HVK YP+++++ + + R Y    R   AL  FA KG+ ++  +    +P
Sbjct:   24 VVEVTEVDFDAQVAKGPTLVDVYADWCGHCRQLAPVWEELAKELEGEVYVVKVNGPKCRSLQQRLHVKAYPSILYLRDGEMRSYDAAQRTVQALAAFARKGWRRTKPVPFYMAP 137          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: J4CD11_THEOR (Transmembrane protein 17 n=3 Tax=Theileria orientalis TaxID=68886 RepID=J4CD11_THEOR)

HSP 1 Score: 92.4 bits (228), Expect = 3.450e-19
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 0
Query:   60 DFETADSDVVQITTENYTETIKQ-------GTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAI 175
            D E  +S+ +   TE+  E + Q       GTWFVKFY  WCSHC+++ P WE LAK+LKG+V V  V+   +  L  RF +KGYPTLV  H  K   Y+   R    L  FA   ++K+ A+
Sbjct:   21 DLERENSNHLVTLTESTFEKLTQASSGSTTGTWFVKFYAPWCSHCRRMAPAWESLAKELKGQVNVADVDVTRNPKLGRRFQIKGYPTLVLFHKGKMYHYEGGERTVEKLSQFALGEFSKTDAL 143          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A0L0DS11_THETB (Protein disulfide isomerase A n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DS11_THETB)

HSP 1 Score: 95.1 bits (235), Expect = 6.270e-19
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   55 DKASEDFETADSDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEK 167
            D+  +D    DSDVV +  +N+   +  G+W VKFY  WC HCK + P W+E A  L G   +G+V+C    ++CSR+ V+GYPTL +  +   R Y+   R+  AL+ +AE+
Sbjct:   32 DEFDDDLTEVDSDVVILGDDNFDARVMDGSWLVKFYAPWCGHCKAIAPVWKETASHLLGVTSMGKVDCTVHSSICSRYGVRGYPTLKYFKDGVPRDYR-GGRSVEALVAYAER 143          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A4V1IW28_9FUNG (Thioredoxin domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IW28_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 6.900e-19
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   69 VQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 140
            ++++  ++   I  G WF+KFY  WC HC+ L P W++L+  LKG+V VG VNC+ ++ LCSRF V+GYPTL
Sbjct:  138 IELSISSFDAMISHGPWFIKFYAPWCGHCQHLAPVWDQLSLKLKGQVNVGSVNCDVEKGLCSRFEVRGYPTL 209          
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match: A0A7S2S4S3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4S3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.310e-18
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   67 DVVQITTENYTETIKQGT-WFVKFYTDWCSHCKQLQPTWEELAKDL-------KGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSRKFVLEQVASGTP-IWLLCIYAVSGLVVMTTAISLI-LVATKRPKQD 244
            +VV +   ++  +I+ G  W ++FY  WC HC +  PT+E +AK L       + KV V +V+   DRAL SRF+V+G+PT   +     R Y  K R + AL  FA K Y +   I  L SPFGP+   +A L+     +  +    V  G P I+     A  G+V   TAI +I  +   +PK+D
Sbjct:   32 EVVDLDARSFDSSIRDGNAWLIEFYAPWCGHCTRFAPTYEAVAKQLHENQSTSERKVMVAKVDGGGDRALASRFNVRGFPTFYLIDGWTVREYTGK-RTQDALFQFATKTYEEYEPIPFLNSPFGPMGQSRALLMRVGTKTIDYHASMVKRGYPSIFAAITLAAFGIVFGLTAILVIGFMTLPKPKED 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H4_9PHAE2.510e-7259.78Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A5J4XL76_9CHLO6.290e-2338.46Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
A0A397TX59_9GLOM1.820e-2153.42Thioredoxin-like protein n=2 Tax=Gigaspora TaxID=4... [more]
A0A0G4FAB9_VITBC6.070e-2042.74Thioredoxin domain-containing protein n=2 Tax=Vitr... [more]
Q16961_ACACA2.740e-1955.71Disulfide-like protein n=2 Tax=Acanthamoeba castel... [more]
C1E147_MICCC3.300e-1938.60Thioredoxin domain-containing protein n=1 Tax=Micr... [more]
J4CD11_THEOR3.450e-1941.46Transmembrane protein 17 n=3 Tax=Theileria orienta... [more]
A0A0L0DS11_THETB6.270e-1938.94Protein disulfide isomerase A n=1 Tax=Thecamonas t... [more]
A0A4V1IW28_9FUNG6.900e-1948.61Thioredoxin domain-containing protein n=1 Tax=Tham... [more]
A0A7S2S4S3_9STRA1.310e-1834.57Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 47..190
e-value: 3.1E-35
score: 123.4
NoneNo IPR availablePANTHERPTHR45815FAMILY NOT NAMEDcoord: 25..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 238..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..212
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..36
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..36
score: 0.513
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 68..163
e-value: 5.2E-23
score: 81.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 51..198
score: 13.263
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 63..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10195contigP-canaliculata_contig10195:5353..9683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10195.285.1mRNA_P-canaliculata_contig10195.285.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10195 5160..11383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10195.285.1 ID=prot_P-canaliculata_contig10195.285.1|Name=mRNA_P-canaliculata_contig10195.285.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=245bp
MSVIVFPRLRSRSPYCAGKLLLGALLLLFTVAACLGAAVVGSGGGVKGIV
QRKGDKASEDFETADSDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQL
QPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRV
YKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSR
KFVLEQVASGTPIWLLCIYAVSGLVVMTTAISLILVATKRPKQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf