prot_P-canaliculata_contig10190.280.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10190.280.1
Unique Nameprot_P-canaliculata_contig10190.280.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length473
Homology
BLAST of mRNA_P-canaliculata_contig10190.280.1 vs. uniprot
Match: A0A1V8TK25_9PEZI (RNA-directed DNA polymerase n=1 Tax=Rachicladosporium antarcticum TaxID=1507870 RepID=A0A1V8TK25_9PEZI)

HSP 1 Score: 117 bits (293), Expect = 3.910e-24
Identity = 82/259 (31.66%), Postives = 136/259 (52.51%), Query Frame = 0
Query:    6 PAGAFNVHQVPSFAGSAKEDAKRWLDKLTFEERTHGVS-PGQMVWSFNVLLVEKVAEWADTNHLLQTILFKPIHEVTAENWTTVKNGFLLRWKKPARERMNPVQEVNSLRQGMEESLESYYSRANNLL----GWMNIPDSVQAGATLLQFVTQAFVKGLQDEDIQIRLMRVMPQEE---RTLMETFEAVSRVFQLRDMEDALEREHDQDRELEILRRFYDAYTGRSGEDPSEVSAEALSIRSRTSGACVSMEGPSRHPQ 256
            PA      Q+  F G+  +DAKRW  +L    +  GV+ P   +  FN  L +K AEWA+ +HL++ +L +   EV   +  TVK+ F+  W K  R   N + E+ +L+Q  +E+L  YY+RA NLL    G  N   + QA  ++L   T A+ +G+ DE++++R+MR+   ++   RTL  T+E    + +L   E A+  E  +++ELE+L+ +           PS    E +++ +    A   + GPS+H Q
Sbjct:   66 PAPQVTASQMEVFIGAPHQDAKRWWARLVANLQRDGVTEPRAKLDQFNSFLGDKPAEWAEDDHLVKRLLDEENDEVREADVKTVKDAFIADWGKKPRAAPNAIPEIQTLKQKSDETLRQYYNRAMNLLRSAGGDDNTATASQASKSILSLATTAYKRGIFDEELRLRVMRMAEPDDGNVRTLQNTYEKAESMERLIRDEHAMIGESRKEKELEVLKAY--VMDRSMNRQPSAAIMEQVALITGVPFARQEVAGPSQHHQ 322          
BLAST of mRNA_P-canaliculata_contig10190.280.1 vs. uniprot
Match: A0A420HQ53_9PEZI (CCHC-type domain-containing protein n=1 Tax=Erysiphe neolycopersici TaxID=212602 RepID=A0A420HQ53_9PEZI)

HSP 1 Score: 56.6 bits (135), Expect = 7.920e-5
Identity = 54/217 (24.88%), Postives = 98/217 (45.16%), Query Frame = 0
Query:   16 PSFAGSAKED----AKRWLDKLTFEERTH--GVSPGQMVWSFNVLLVEKVAEWADTNHLLQTILFKPIHEVTAENWTTVKNGFLLRW--KKPARERMNPVQEVNSLRQGMEESLESYYSRANNLLGWMNIPDSVQAGA--------TLLQFVTQAFVKGLQDEDIQIRLMRVMPQEERTLMETFEAVSRVFQLRDMEDALEREHDQDRELEILRRFY 216
            P+F  S K D    A RWL++L  + + H   V+      + ++L V +  +  D++      + K   E   ++    K   + R+  KK  +E  N  +++ +L+Q + E L SYY RA  LL   N  D  +AG         T+L  + ++FV+G++D +++  ++        +L   FE   +        + +E+E  +  ELE  R  Y
Sbjct:    8 PTFQISGKFDGSMPAVRWLNQLICDLQPHYEKVTAEVFFEAISILFVGEAGDGLDSSPEFTKFIDKE-EEPNTKDMEDFKMAVMKRFPRKKLEKEVSNVQEDIQNLQQELNEPLNSYYDRAQELLRRSNGRDDQEAGTEPLSILERTILSIIIKSFVRGIRDNEVRTIILTKSTILSGSLRSAFEKTKKAIATISQREEIEKERIEKLELEHFRNQY 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10190.280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1V8TK25_9PEZI3.910e-2431.66RNA-directed DNA polymerase n=1 Tax=Rachicladospor... [more]
A0A420HQ53_9PEZI7.920e-524.88CCHC-type domain-containing protein n=1 Tax=Erysip... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10190contigP-canaliculata_contig10190:10367..11785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10190.280.1mRNA_P-canaliculata_contig10190.280.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10190 9936..11805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10190.280.1 ID=prot_P-canaliculata_contig10190.280.1|Name=mRNA_P-canaliculata_contig10190.280.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=473bp
MAQPPPAGAFNVHQVPSFAGSAKEDAKRWLDKLTFEERTHGVSPGQMVWS
FNVLLVEKVAEWADTNHLLQTILFKPIHEVTAENWTTVKNGFLLRWKKPA
RERMNPVQEVNSLRQGMEESLESYYSRANNLLGWMNIPDSVQAGATLLQF
VTQAFVKGLQDEDIQIRLMRVMPQEERTLMETFEAVSRVFQLRDMEDALE
REHDQDRELEILRRFYDAYTGRSGEDPSEVSAEALSIRSRTSGACVSMEG
PSRHPQQQHAWYQAPPPQQMPPAWYYYRGPLSSQPGPSSSSQQAPPPMPL
SPTEIAPAPASPVEETPAEDNEEPEPMEVQAAEPPARDPPPPVGPEEPTT
ENEADALPAPKVAPTTESVGECWSPPGVLQVAGSVQTESDGATKIAVIRV
SPPPPPEPPPWLVTGRLFVRFFPLSLCVNREVDVWGEGVARGLGKEVRLI
GRHTRKGGYGQPMGIWRVPPRR*
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