prot_P-canaliculata_contig101543.242.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101543.242.1
Unique Nameprot_P-canaliculata_contig101543.242.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length47
Homology
BLAST of mRNA_P-canaliculata_contig101543.242.1 vs. uniprot
Match: A0A4P5ZB65_9BACT (Transposase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5ZB65_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 3.750e-12
Identity = 27/46 (58.70%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MGSFTKLTYHVVLSTKFHQPTITEDIQQEFNEYVGGTVCGQKGNLV 46
            MGSFT+LTYH+V +TK+ + TITE IQ+   EY+GGT+ G+KG+L+
Sbjct:    1 MGSFTRLTYHIVFATKYRKRTITEQIQERLYEYIGGTLRGKKGHLI 46          
BLAST of mRNA_P-canaliculata_contig101543.242.1 vs. uniprot
Match: A0A353B3L2_9PLAN (IS200/IS605 family transposase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353B3L2_9PLAN)

HSP 1 Score: 53.9 bits (128), Expect = 1.110e-7
Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MGSFTKLTYHVVLSTKFHQPTITEDIQQEFNEYVGGTVCGQKGNLV 46
            MGSFT+LTYH+V +TK+ +  I  +I+Q+  +Y+GGT+   KG+ +
Sbjct:    1 MGSFTRLTYHIVFATKYRKRIIDSEIRQKLYQYIGGTLRANKGHAI 46          
BLAST of mRNA_P-canaliculata_contig101543.242.1 vs. uniprot
Match: UPI0011F24332 (IS200/IS605 family transposase n=1 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI0011F24332)

HSP 1 Score: 49.3 bits (116), Expect = 6.670e-6
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    1 MGSFTKLTYHVVLSTKFHQPTITEDIQQEFNEYVGGTVCGQKGNLV 46
            M +FT L +H++ STK+ +PTI  + Q +   YVGG V  QKG L+
Sbjct:    1 MSAFTNLLFHIIHSTKYREPTIRSEWQDDLYAYVGGIVRDQKGTLL 46          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101543.242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A4P5ZB65_9BACT3.750e-1258.70Transposase n=1 Tax=Verrucomicrobia bacterium TaxI... [more]
A0A353B3L2_9PLAN1.110e-745.65IS200/IS605 family transposase n=1 Tax=Planctomyce... [more]
UPI0011F243326.670e-645.65IS200/IS605 family transposase n=1 Tax=Roseiconus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101543contigP-canaliculata_contig101543:572..712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101543.242.1mRNA_P-canaliculata_contig101543.242.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101543 572..1009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101543.242.1 ID=prot_P-canaliculata_contig101543.242.1|Name=mRNA_P-canaliculata_contig101543.242.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=47bp
MGSFTKLTYHVVLSTKFHQPTITEDIQQEFNEYVGGTVCGQKGNLV*
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