prot_P-canaliculata_contig101493.239.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101493.239.1
Unique Nameprot_P-canaliculata_contig101493.239.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length324
Homology
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: UPI0016757282 (AraC family transcriptional regulator n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016757282)

HSP 1 Score: 321 bits (822), Expect = 1.850e-105
Identity = 150/323 (46.44%), Postives = 220/323 (68.11%), Query Frame = 0
Query:    1 LESLGFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATAET 323
            L   GFP+ KSL  L +     K    RLS++PF++ L  A+E   +P +AL +GHKFRV TF +TG++Y YCKNL  VI MN++YQK+AID G+  + +D   +  M F PHY D+E+YR ITD+IMG+Y   Y WL+WGSGE+IL   LPY  P+NL  HE I++  + F++  T L+FSD AM   + +++PERL+R + +LD ++G     K+F+ +++ A+  AI++G +++ +VADRMGL+ SAFR  +  SG   R R+D +R+ +F E   +GQ+FSQIA+ LAYNDQ AMN+AF+RW+G+TPS+W     + E+
Sbjct:   17 LAGFGFPREKSLSLLNIGEDAFKNPDARLSVEPFLELLNFASEALGDPQLALRVGHKFRVATFAETGSVYGYCKNLEAVIKMNDQYQKLAIDVGKVTFVQDGPDQNFMVFSPHYEDMERYRRITDVIMGAYFAAYHWLSWGSGEEILGVQLPYAAPENLKTHEAIYQIPIQFNAEQTSLQFSDIAMADTLMSYNPERLVRIKKRLDNMIGQGACTKSFDTSVNAAILAAIKNGHITSHVVADRMGLTWSAFRTALKRSGPVFRDRVDAVRQGLFHEYLAEGQSFSQIALGLAYNDQPAMNRAFRRWYGMTPSQWKAARHSGES 339          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: UPI0003F644E7 (AraC family transcriptional regulator n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003F644E7)

HSP 1 Score: 196 bits (498), Expect = 1.020e-56
Identity = 105/321 (32.71%), Postives = 175/321 (54.52%), Query Frame = 0
Query:    1 LESLGFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            LE+ GFP+  +L  LG+    L     R+  +        AA+  S+P I + +G+KFRV  + +TG +Y+YC N+ + + +N RYQ +A+D G  EY  +D GR H      Y   +    +   + G++ T  RWL+W +G+++   HL    P+++  +E++ +  +VF      +EF   ++ + + + DPE+L +    LD++L L    +   AAI+ +++GA+  G V+  +VA RM L     R  ++      R  L+  RKK+F E +   ++F  IA SLAYNDQAA N+AFKRW+GI P ++    + A
Sbjct:   28 LENFGFPRENALAALGIGEDILANPKARIEAERAEHMYQVAAQALSDPRIGIRVGYKFRVNDYQKTGAIYSYCDNIGQALELNRRYQCLAVDVGMPEYRIED-GR-HFFLYNRYEAAKDMHHVMGAVFGAWATMLRWLSWAAGQELKEAHLMPRAPEDISFYEEVVQCPIVFGMPRNHVEFHPESITKPLISRDPEKLAQCVALLDKVLNLSHEIETLRAAIEASIQGAMAEGYVNLTVVARRMNLGERQLRKMLSQQNISFRNLLEDERKKLFKELHARDESFVSIAQSLAYNDQAAFNRAFKRWYGIAPGQYEATQSEA 346          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A363UL76_9GAMM (AraC family transcriptional regulator n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A363UL76_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 4.150e-20
Identity = 78/320 (24.38%), Postives = 141/320 (44.06%), Query Frame = 0
Query:    1 LESLGFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTH--LPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRD-GQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQ 317
            +E  G      L  +GL A  L  + DR+    F     AAA     P++ L +G   R G +G  G +   C  L + +  + RYQ++  D G+A       G+  + +          R + +  +  +V+  RW+T   GED+  T   LP+P P +  AH  +F+  + FD+  T LEF    ++  +   DP    +      ++L     ++  E  +   LR  + +G       A  + ++    + ++   G      +D  R+ + +E + + G   +++A  L ++DQ A N+AF+RWF +TP +   Q
Sbjct:   16 VEQAGGDVPALLSQVGLSAQALAPTADRVPGAVFARLFDAAAAQLRRPDLGLAVGSAIRPGHYGVLGYVVMSCDTLGDALTRHLRYQRLVADIGEASLTPLPDGQLRLTWATQRPPT---RQLAEHNLAGWVSYARWIT---GEDLSPTRVLLPHPAPDDQQAHAALFQCPVHFDAGVTALEFPAHYLDLRMAQADPGLREQMDRYAQRLLTEYAQSRRAEGRLRHWLRRHLAAGDAQLVTAAAALNVAPRTLQRRLATEGWTFNRLVDDTRRTLALELFAEPGMTGAELAFMLGFSDQTAFNRAFRRWFDMTPGEARSQ 329          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A6N7LXM6_9GAMM (Helix-turn-helix domain-containing protein n=2 Tax=Alcanivorax sediminis TaxID=2663008 RepID=A0A6N7LXM6_9GAMM)

HSP 1 Score: 91.3 bits (225), Expect = 3.460e-17
Identity = 73/319 (22.88%), Postives = 141/319 (44.20%), Query Frame = 0
Query:    5 GFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAID-AGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVE-KYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            G   + +L  LG+   DL+    R+S+      +  A + +++P   LH+G   R    G+ G        LR+ I +   + K+  + AG    ++DDQ    + +      +  Y    D    + +T  RW+  G   +    HL +    N   +++IF   +VF+     +  S+  ++  +   DP+    AR+++ + +    A       + + ++   + G    E +AD +G+     R ++ A        L+  R+++  +      ++ +QIA+ L Y++Q+A N+AFKRWFGITP  +  Q   A
Sbjct:   30 GVDLSTALVELGVSNDDLENPQSRISMTVEDQLIRKALQHSNDPLFGLHMGEAIRPRFMGELGYASMSSATLRDAIELMIPFMKVTTEYAGIRFEWRDDQ--LWLIWESDMEALPTYPMRIDANFAAAITFGRWIL-GKDYNPERIHLRHAPQGNAAEYQRIFNCAVVFEQQENAIVLSNDILDLPLRDADPDVHKLARSRMQRAVTQYHARDNLLDQVRLEIQKCFQRGVPQLEPIADELGVKPWTLRRQLRAENTDFSSLLEEERRRIACDWLLHSERSVNQIALDLGYSEQSAFNRAFKRWFGITPVSYRDQGRDA 345          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: UPI00110D467F (AraC family transcriptional regulator n=1 Tax=Alcanivorax gelatiniphagus TaxID=1194167 RepID=UPI00110D467F)

HSP 1 Score: 90.1 bits (222), Expect = 8.670e-17
Identity = 72/318 (22.64%), Postives = 138/318 (43.40%), Query Frame = 0
Query:    5 GFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDG-QNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            G   + +L  LG+   DL+    RL L      L  A   + +P   LH+G   R    G+ G        LR+ I +   + ++  +  +  +   D     +      S +  +R   D  +   V   RW+  G   D L+ HL +P P   D + ++F+  + F      +      +++ +   DPE    AR+++ + +    A       + + ++  +  G    E +A+R+G+     R ++ A        L+  R+++  +  R   ++ +QIA+ L Y++Q+A N+AFKRWFG+TP  + + +  A
Sbjct:   30 GVDLSDALVRLGVSEADLESPHARLPLKVEQRLLEHAVTRSGDPLFGLHMGEGIRPRFMGELGYASMSSATLRDAIELMIPFTRVTSEFFELRFEWRDDDLWLIWDTLDNSPLSGHRV--DATLAGAVVFGRWIL-GEDHDPLAVHLVHPAPDQDDEYRRVFRCPIHFGQTLNAVVLDAGVLDRPLRDADPEVHRLARSRVQRAVTQYRARDNLLEQVRLEIQQRLIKGIPQLEPIAERLGVKPWTLRRRLRAEQTDFSTLLEDERRRLACDWLRHSDRSVNQIALDLGYSEQSAFNRAFKRWFGVTPVHYREHHRDA 344          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A220SLK0_9GAMM (AraC family transcriptional regulator n=1 Tax=Alcanivorax sp. N3-2A TaxID=2014542 RepID=A0A220SLK0_9GAMM)

HSP 1 Score: 89.7 bits (221), Expect = 1.240e-16
Identity = 71/315 (22.54%), Postives = 141/315 (44.76%), Query Frame = 0
Query:    5 GFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQ-HMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVE-KYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQ 317
            G   + +L  LG+   DL+    R+ L      L  A E + +P   LH+G   R    G+ G        LR+ I +   + ++  +  +  +  + QG    + +   + D    R   +      V   RW+  G+ +D L+ HL +P P     ++++F+  + F+     L   +A ++  +   DPE    +R+++ + L   +A       + + ++  +  G    E +A+R+G+     R ++ A        L+  R+++  +      ++ +QIA+ L Y++Q+A N+AFKRWF +TP  +  Q
Sbjct:   30 GVDLSDALVRLGVSEHDLEAPGARIPLRIEDRLLQLALEGSDDPLFGLHMGECIRPRFMGELGYASMSSATLRDAIELMIPFARVTSEFAELRF--EWQGHDLWLIWETPFHDRVTSRHRLEAFFAGAVVFGRWIL-GADKDPLAVHLRHPPPGGEQEYQRLFRCPVRFNQPDNALVIDEALLDLPLRDADPEVNRLSRSRMQRALTQYLARDNLLEQVRLEIQRRLVDGVPQLERIAERLGVKPWTLRRRLRAEQADFSTLLEEERQRLACDWLLHSDRSVNQIALDLGYSEQSAFNRAFKRWFAVTPLAYRDQ 341          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: UPI001BA83C37 (AraC family transcriptional regulator n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BA83C37)

HSP 1 Score: 88.2 bits (217), Expect = 3.840e-16
Identity = 67/312 (21.47%), Postives = 138/312 (44.23%), Query Frame = 0
Query:    5 GFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDA---GQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQNFS--QIAMSLAYNDQAAMNKAFKRWFGITP 311
            G  +A  L   G+++  L+    RL    F   +  A   T +P +AL  G    +  F   G +    + ++  +   NRY ++ ++    G+A+ F+       +       +   +  +T+       T  R   +G    +L  H+ +P P     +++IF++ +VF+++   L    A +   I               + +L    ++ +  A ++  L   + +G+VS E++A  +G+SR     ++ A G      LD +R+++ +  Y +G+  S  ++A  + ++D AA ++AFKRW G +P
Sbjct:   22 GADRAVLLERAGIDSRLLEDQDSRLPFARFAALMRVAKALTGDPALALRFGETIDLSDFSIVGLIANASETMQHALTQLNRYGRLVVEVDGVGEADRFQHQMIAGQLWMTDTRKNPNDFPELTESTFARMATHTR--RFGDTPFVLEVHVTHPEPAYRAEYDRIFRAPVVFEADRNALRIDPAWIGYRIQLQPRYAFGVLSRHAEALLESLESSNSVRARVESRLMPILHTGEVSMELIARDLGMSRQTLFRRLKAEGVTFEKLLDDLRRRLALH-YLNGRRASVNEVAYLVGFSDPAAFSRAFKRWTGASP 330          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A095SFD7_9GAMM (AraC family transcriptional regulator n=5 Tax=Alcanivorax TaxID=59753 RepID=A0A095SFD7_9GAMM)

HSP 1 Score: 88.2 bits (217), Expect = 4.270e-16
Identity = 66/310 (21.29%), Postives = 138/310 (44.52%), Query Frame = 0
Query:   15 LGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHE--QIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVE-KYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            LG+   DL+    R+++      L  A + + +P   LH+G   R    G+ G        L + I +   + K+  +  Q  +   D+    + +     D+  Y A  D      +T  RWL    G+++    + +  P   +  E  +IF+ ++ F+     +    + ++  +   DPE    AR+++ + +    A       + + ++  ++ G    E +AD++G+     R ++ +        L+  R+++  +      ++ +QIA+ L Y++Q+A N+AFKRWFG+TP  + +Q  +A
Sbjct:   40 LGISNDDLENPQSRIAMTVENQLLKQAMQKSGDPLFGLHMGEGIRPRFIGELGYASMSSATLGDAIELMIPFTKVTSECAQLRFEWRDKSLW-LIWESDLEDLATYPARIDANFAGAITYGRWLI---GKEMSPARVLFRHPPQGEEQEYQRIFRCEVAFEQPQNAIVLDASLLDLPLRDADPEMHKVARSRMQRAVTQYHARDNLLEQVRLEIQKRLQQGVPQLEPIADQLGIKPWTLRRQLRSENTDFSSLLEDERRRLACDWLLHSDRSVNQIALDLGYSEQSAFNRAFKRWFGVTPVHYREQQGSA 345          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A095TU38_9GAMM (AraC family transcriptional regulator n=1 Tax=Alcanivorax nanhaiticus TaxID=1177154 RepID=A0A095TU38_9GAMM)

HSP 1 Score: 87.4 bits (215), Expect = 7.800e-16
Identity = 74/322 (22.98%), Postives = 144/322 (44.72%), Query Frame = 0
Query:    5 GFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEK---YRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDA-HEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVE-KYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            G   + SL  LG+   DL+    R+++      +  A   +++P   LH+G   R    G+ G        LR+ I +   + K+  +     +    + R +  +    SD+E    Y    D    + +T  RW+  G   +    HL +P P+  +A + +IF  ++ F  +   +  SD  ++  +   DPE    AR+++ + +    A       + + ++  ++ G    E +AD +G+     R ++ A        L+  R+++  +      ++ +QIA+ L Y++Q+A N+AFKRWFG+TP  + +Q   A
Sbjct:   30 GVDLSSSLVELGVSNEDLENPQSRIAMAVEDQLIRQALIHSNDPLFGLHMGEVIRPRFMGELGYASMSSATLRDAIELMIPFMKVTTEYAALRF----EWRNNYLWLIWESDMESLPTYPMRIDANFAAAITFGRWIL-GKNYNPELIHLRHP-PQGAEAEYLRIFGCEVAFQQSENAIVLSDDILDLPLRDADPEVHKLARSRMQRAVTQYHARDNLLDQVRLEIQKCLQDGVPQLEPIADELGVKPWTLRRQLRAENTDFSSMLEEERRRLACDWLLHSERSVNQIALDLGYSEQSAFNRAFKRWFGMTPVSYREQGRDA 345          
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Match: A0A845MMH1_9GAMM (Helix-turn-helix domain-containing protein n=2 Tax=unclassified Alcanivorax TaxID=2638842 RepID=A0A845MMH1_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 2.730e-15
Identity = 66/309 (21.36%), Postives = 134/309 (43.37%), Query Frame = 0
Query:   15 LGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEY-FKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQ-NFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATA 321
            LG+   DL+    R+++      +  A + +++P   LH+G   R    G+ G        LR+ I +   + K+  +     + +KD+     + +      +  Y    D    + +T  RW+  G   +    H  +P   +   +++IF   + F+     +  S   ++  +   DP+    AR+++ + +    A       + + ++   + G    E +AD +G+     R ++ A        L+  R+++  +     Q + +QIA+ L Y++Q+A N+AFKRWFGITP  + +Q   A
Sbjct:   40 LGVSNEDLENPQSRIAMTVEDQLIRLALKHSNDPLFGLHMGEAIRPRFMGELGYASMSSATLRDAIELMIPFMKVTTEYASMRFEWKDED--LWLIWDSDMEAMPTYPMRIDANFAAAITFGRWIL-GQSYNPERIHFQHPAQGDPQEYKRIFNCPVAFEQPENAIVLSHQLLDLPLRDADPDVHKLARSRMQRAVTQYHARDNLLDQVRLEIQKCFQQGVPQLEPIADELGVKPWTLRRQLRAENTDFSSLLEEERRRLACDWLLHSQRSVNQIALDLGYSEQSAFNRAFKRWFGITPISYREQGREA 345          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101493.239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00167572821.850e-10546.44AraC family transcriptional regulator n=1 Tax=Lito... [more]
UPI0003F644E71.020e-5632.71AraC family transcriptional regulator n=1 Tax=Hell... [more]
A0A363UL76_9GAMM4.150e-2024.38AraC family transcriptional regulator n=2 Tax=Gamm... [more]
A0A6N7LXM6_9GAMM3.460e-1722.88Helix-turn-helix domain-containing protein n=2 Tax... [more]
UPI00110D467F8.670e-1722.64AraC family transcriptional regulator n=1 Tax=Alca... [more]
A0A220SLK0_9GAMM1.240e-1622.54AraC family transcriptional regulator n=1 Tax=Alca... [more]
UPI001BA83C373.840e-1621.47AraC family transcriptional regulator n=1 Tax=Caul... [more]
A0A095SFD7_9GAMM4.270e-1621.29AraC family transcriptional regulator n=5 Tax=Alca... [more]
A0A095TU38_9GAMM7.800e-1622.98AraC family transcriptional regulator n=1 Tax=Alca... [more]
A0A845MMH1_9GAMM2.730e-1521.36Helix-turn-helix domain-containing protein n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018060DNA binding HTH domain, AraC-typeSMARTSM00342aracneu4coord: 234..315
e-value: 3.9E-6
score: 36.4
IPR018060DNA binding HTH domain, AraC-typePFAMPF12833HTH_18coord: 241..316
e-value: 1.6E-9
score: 37.9
IPR018060DNA binding HTH domain, AraC-typePROSITEPS01124HTH_ARAC_FAMILY_2coord: 265..317
score: 13.048
IPR032687HTH-type transcriptional regulator AraC-type, N-terminalPFAMPF12625Arabinose_bdcoord: 12..187
e-value: 6.8E-23
score: 81.7
NoneNo IPR availableGENE3D1.10.10.60coord: 214..322
e-value: 1.7E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR47894FAMILY NOT NAMEDcoord: 2..320
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 280..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101493contigP-canaliculata_contig101493:1..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101493.239.1mRNA_P-canaliculata_contig101493.239.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101493 1..972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101493.239.1 ID=prot_P-canaliculata_contig101493.239.1|Name=mRNA_P-canaliculata_contig101493.239.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=324bp
LESLGFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNI
ALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFK
DDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTH
LPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLR
ARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSA
FRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQNFSQIAMSLAYNDQAAMN
KAFKRWFGITPSKWSKQNATAET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018060HTH_AraC
IPR032687AraC-type_N
IPR009057Homeobox-like_sf