Homology
BLAST of mRNA_P-canaliculata_contig101366.227.1 vs. uniprot
Match:
A0A4V1SB54_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4V1SB54_9BACT)
HSP 1 Score: 48.1 bits (113), Expect = 2.930e-5
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 13 ERKVRENPTKSVLYAAAAGYGLLLLPAGSLLRLPLRLGAVLAKPALLGLGAAKLYEIVQKKT 74
E +VR++P +SVL A G L +P S+L ++L + LA PALL GAAKL EI+QKK+
Sbjct: 34 EDRVRKHPVESVLGAVVVGCLLHRMPVRSILVAKVKLVSALAPPALLAYGAAKLCEILQKKS 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101366.227.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M E T T S T T K L E Q L E R K V R E N P T K S V L Y A A A A G Y G L L L L P A G S L L R L P L R L G A V L A K P A L L G L G A A K L Y E I V Q K K T V S * 10 20 30 40 50 60 70 Expect = 2.93e-5 / Id = 48.39 Sequence A0A4V1SB54_9BACT
Match Name E-value Identity Description
A0A4V1SB54_9BACT 2.930e-5 48.39 Uncharacterized protein n=1 Tax=Verrucomicrobiacea... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M E T T S T T K L E Q L E R K V R E N P T K S V L Y A A A A G Y G L L L L P A G S L L R L P L R L G A V L A K P A L L G L G A A K L Y E I V Q K K T V S * 10 20 30 40 50 60 70 Score = Score = Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 68..76 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..23 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 44..48 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 49..67 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 24..43 None No IPR available TMHMM TMhelix coord: 24..43
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig101366.227.1 ID=prot_P-canaliculata_contig101366.227.1|Name=mRNA_P-canaliculata_contig101366.227.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=77bp back to top