Homology
BLAST of mRNA_P-canaliculata_contig101322.222.1 vs. uniprot
Match:
A0A5C5UXF0_9BACT (Uncharacterized protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5UXF0_9BACT)
HSP 1 Score: 58.2 bits (139), Expect = 1.120e-6
Identity = 44/169 (26.04%), Postives = 82/169 (48.52%), Query Frame = 0
Query: 1 RLLRFRLRTILLLILLASAWMAWHLDRSKKQVRAVEGVTSTGGSVIYDFKFDGDPVFTNYRENAESPYPKFILDAVGYDFLHSVVSIRLNPNQDSNDNNKQSTDWAEHLEGVKNLRHVYMRGNQVDDEVLKRLGKLKHLRSVNVWFGT-SVTDKGIQDLAKSRKIKSVR 168
RLLR RLR++LLL+ AS + + + ++ + +A+ + GG V+++ R + P P+++ D +G D+ I L ++N D H + + R + D ++RLG +++L+ V + G S+TDKG+ L + RK+ V+
Sbjct: 9 RLLRIRLRSLLLLMAAASLLLFYPMKAARDRAQALRTIQELGGDVLFE-----------ERSPTDRPVPRWLTDWLGQDYFRRARWIDLLGENFDDEN----IDLIRHFPEARVFCSYHSR---ITDAGMRRLGSMRNLQEV--YLGNLSITDKGLDSLTRLRKLTKVQ 157
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101322.222.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
R L L R F R L R T I L L L I L L A S A W M A W H L D R S K K Q V R A V E G V T S T G G S V I Y D F K F D G D P V F T N Y R E N A E S P Y P K F I L D A V G Y D F L H S V V S I R L N P N Q D S N D N N K Q S T D W A E H L E G V K N L R H V Y M R G N Q V D D E V L K R L G K L K H L R S V N V W F G T S V T D K G I Q D L A K S R K I K S V R F Q H G G L T D E S L K H L S T L P E I E C I D L Q G N C L S D K G L N Y L H D K T N L S E L W V G L G N N N I T N R G L K K L F R L K N I K V L G I Q N I D A T Q N E V N L L K 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.12e-6 / Id = 26.04 Sequence A0A5C5UXF0_9BACT
Match Name E-value Identity Description
A0A5C5UXF0_9BACT 1.120e-6 26.04 Uncharacterized protein n=1 Tax=Posidoniimonas cor... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
R L L R F R L R T I L L L I L L A S A W M A W H L D R S K K Q V R A V E G V T S T G G S V I Y D F K F D G D P V F T N Y R E N A E S P Y P K F I L D A V G Y D F L H S V V S I R L N P N Q D S N D N N K Q S T D W A E H L E G V K N L R H V Y M R G N Q V D D E V L K R L G K L K H L R S V N V W F G T S V T D K G I Q D L A K S R K I K S V R F Q H G G L T D E S L K H L S T L P E I E C I D L Q G N C L S D K G L N Y L H D K T N L S E L W V G L G N N N I T N R G L K K L F R L K N I K V L G I Q N I D A T Q N E V N L L K 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.0E-20 / Score = 75.5 Expect = 1.4 / Score = 9.2 Score = Score = Score = Score = Score = Score = Score = Score = 0.796 Score = Score = Sequence G3DSA:3.80.10.10 PF13516 PTHR13318:SF72 PTHR13318 SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM SSF52047 TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
IPR032675 Leucine-rich repeat domain superfamily GENE3D 3.80.10.10 coord: 72..256 IPR001611 Leucine-rich repeat PFAM PF13516 LRR_6 coord: 189..203 None No IPR available PANTHER PTHR13318:SF72 LEUCINE-RICH REPEAT FAMILY PROTEIN coord: 108..256 None No IPR available PANTHER PTHR13318 UNCHARACTERIZED coord: 108..256 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 9..16 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 22..257 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..21 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 17..21 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..8 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..22 None No IPR available SUPERFAMILY 52047 RNI-like coord: 98..246 None No IPR available TMHMM TMhelix coord: 7..24
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig101322.222.1 ID=prot_P-canaliculata_contig101322.222.1|Name=mRNA_P-canaliculata_contig101322.222.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=257bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: