prot_P-canaliculata_contig101288.217.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101288.217.1
Unique Nameprot_P-canaliculata_contig101288.217.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length178
Homology
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BLAST of mRNA_P-canaliculata_contig101288.217.1 vs. uniprot
Match: A0A1G8TUV8_9GAMM (Uncharacterized protein n=2 Tax=Ferrimonas TaxID=44011 RepID=A0A1G8TUV8_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 2.890e-7
Identity = 34/122 (27.87%), Postives = 61/122 (50.00%), Query Frame = 0 
Query:   56 HFDHPKKPAIIDALLDCFGSAGGLPFKATGSALIVNNNDSNFAHIKKLVTGTSHADHPVIYVTKNFLAGKTLEPDDLAQRLYGIAYVWVERDKHIGKKLRNWLARQKIQQELWPGSACLYWP 177
            H    KKP I+  +L+ FG         T     + +N+++FA I +++ G S    PV+Y + +     +++PDDLA+ L G+A+V VE  +     L+     + +    + G+  +YWP
Sbjct:  114 HSPQAKKPYIVRLILEHFGGGQDANLTITDEPTRLQDNEADFAAISRIINGESDNMLPVVYCSADEYNRCSVDPDDLAKWLSGMAHVLVEPHRRFSFDLKEATEGKNV----YLGAVGIYWP 231
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101288.217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1G8TUV8_9GAMM2.890e-727.87Uncharacterized protein n=2 Tax=Ferrimonas TaxID=4... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101288contigP-canaliculata_contig101288:456..989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101288.217.1mRNA_P-canaliculata_contig101288.217.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101288 456..989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101288.217.1 ID=prot_P-canaliculata_contig101288.217.1|Name=mRNA_P-canaliculata_contig101288.217.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=178bp
VTTSIVHHADGRLNVFFCYELCEEHGQDWRNSVTIIRSNERADVRVEAQS
LGDSNHFDHPKKPAIIDALLDCFGSAGGLPFKATGSALIVNNNDSNFAHI
KKLVTGTSHADHPVIYVTKNFLAGKTLEPDDLAQRLYGIAYVWVERDKHI
GKKLRNWLARQKIQQELWPGSACLYWPE
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