prot_P-canaliculata_contig101172.206.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101172.206.1
Unique Nameprot_P-canaliculata_contig101172.206.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length231
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig101172.206.1 vs. uniprot
Match: UPI000784DF07 (hypothetical protein n=1 Tax=Aquimarina longa TaxID=1080221 RepID=UPI000784DF07)

HSP 1 Score: 85.5 bits (210), Expect = 1.740e-15
Identity = 68/233 (29.18%), Postives = 118/233 (50.64%), Query Frame = 0 
Query:    2 ERIDKVLGKEQRDYCKNKIDSARKALTSYLKSNYYKKCETEHLEFIGESLTDAKQLHLLFLKQLAPETHNLDSFLLTKEELNKWKSSTTNKEVIAFIKNVIRGTETIGKIIEKKNVLEQLEDKSNLLKVIGITNDLLEVFKDLNENGEDILDDLNRVINSNIIKNFNKGARNEFITSVSDISKQYNKTKFSKLTDWI---INFNEDTRKAIRKTLKKNLKSSHKFMKTRLLVF 231
            +R++ VL  ++R   K KI  AR+    Y  S+YY K E ++LE   + +T +K      L  L    +  DSFL TKEE  +W S+T  K                  I  +  ++E++E  +N LK +GITN L++V + + E+G++IL    + +NS  IK   KG   +   +V+ + K++ K+   + T ++   +N N+ + KA +K  K+ L +    M+ + + F
Sbjct:  342 DRLNIVLATKERLDLKRKIKKAREIFIDYADSDYYAKIENDYLENTTDRITLSKYTKAKLLADLWQPANFKDSFLETKEEAREWVSNT--KXXXXXXXXXXXXXXXXXXIFNEPTIIEEIEGNANYLKFMGITNALMDVTRGIVEDGDEILKVWKKTMNSTRIKI--KGIVQKTSFTVTTLGKEFIKSDLGR-TSFVRKSMNINKKSLKAFKKAQKRFLNNLDDIMQAKQIAF 569
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101172.206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000784DF071.740e-1529.18hypothetical protein n=1 Tax=Aquimarina longa TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101172contigP-canaliculata_contig101172:10..702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101172.206.1mRNA_P-canaliculata_contig101172.206.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101172 10..1005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101172.206.1 ID=prot_P-canaliculata_contig101172.206.1|Name=mRNA_P-canaliculata_contig101172.206.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=231bp
MERIDKVLGKEQRDYCKNKIDSARKALTSYLKSNYYKKCETEHLEFIGES
LTDAKQLHLLFLKQLAPETHNLDSFLLTKEELNKWKSSTTNKEVIAFIKN
VIRGTETIGKIIEKKNVLEQLEDKSNLLKVIGITNDLLEVFKDLNENGED
ILDDLNRVINSNIIKNFNKGARNEFITSVSDISKQYNKTKFSKLTDWIIN
FNEDTRKAIRKTLKKNLKSSHKFMKTRLLVF
back to top