prot_P-canaliculata_contig1009.166.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1009.166.1
Unique Nameprot_P-canaliculata_contig1009.166.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length95
Homology
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BLAST of mRNA_P-canaliculata_contig1009.166.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.670e-17
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0 
Query:    1 MTTDSRHLILV--HASEVKAEETETXXXXXXXXXXRRS-RSLEIMFLDPEDGYRLVRTASLPWNVDESALHRSALVCDGDRLVMLEPQNVGRMLQRTA 95
            MTTDSRH+ILV    S  + ++  T  XXXXXX    S R LE++FLDPEDGYRLVRTA+L W +DE+ LH++A++CDG+RLVML  ++ G +++RTA
Sbjct: 1175 MTTDSRHIILVCPAGSGQEGDDPSTAAXXXXXXGDGDSPRRLEMLFLDPEDGYRLVRTATLAWGMDETELHQNAVLCDGERLVMLTHRHSG-VVKRTA 1271
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BLAST of mRNA_P-canaliculata_contig1009.166.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 5.820e-17
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0 
Query:    1 MTTDSRHLILVHASEVKAEETE---TXXXXXXXXXXRRSRSLEIMFLDPEDGYRLVRTASLPWNVDESALHRSALVCDGDRLVMLEPQNVG 88
            MTTDSRH+ILV  +E   E  +                 R LE++FLDPEDGYRLVRTA+L W +DE+ LH++A++CDG+RLVML  ++ G
Sbjct: 1019 MTTDSRHIILVCPAEGGQEGDDPNIAAAAATALGDDDSPRRLELLFLDPEDGYRLVRTATLAWGMDETDLHQNAMLCDGERLVMLTHRDSG 1109
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1009.166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0G0_ECTSI1.670e-1756.12ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K114_9PHAE5.820e-1749.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1009contigP-canaliculata_contig1009:7662..8976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1009.166.1mRNA_P-canaliculata_contig1009.166.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1009 7662..8993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1009.166.1 ID=prot_P-canaliculata_contig1009.166.1|Name=mRNA_P-canaliculata_contig1009.166.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=95bp
MTTDSRHLILVHASEVKAEETETEAETEAQEEARRSRSLEIMFLDPEDGY
RLVRTASLPWNVDESALHRSALVCDGDRLVMLEPQNVGRMLQRTA
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