prot_P-canaliculata_contig1006.125.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig1006.125.1
Unique Name	prot_P-canaliculata_contig1006.125.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	167

Homology

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A150V1F1_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150V1F1_9PEZI)

HSP 1 Score: 192 bits (487), Expect = 5.820e-60
Identity = 90/112 (80.36%), Postives = 102/112 (91.07%), Query Frame = 0

Query:   54 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            R FS  M+K+GVHNLQ+KA+FD+A+KE GL+VLDCFATWCGPCKVIAPQVVKFS  +P+A FYKLDVD+VP+VAQEL +RAMPTFLLFKDGEKV EVVGANPTALE AIKKH
Sbjct:   40 RQFSATMSKQGVHNLQNKAEFDAALKEPGLMVLDCFATWCGPCKVIAPQVVKFSDLYPNARFYKLDVDDVPDVAQELGIRAMPTFLLFKDGEKVGEVVGANPTALEGAIKKH 151

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A1V8U4R0_9PEZI (Thioredoxin n=2 Tax=Rachicladosporium sp. CCFEE 5018 TaxID=1974281 RepID=A0A1V8U4R0_9PEZI)

HSP 1 Score: 186 bits (472), Expect = 1.530e-57
Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 0

Query:   54 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            R FS  M KEGVHNL SKADFDSA+ E GL+VLDCFATWCGPCKVIAPQVVKFS+ + D  FYKLDVDE+P+VAQEL+VRAMPTF++FKDG+KV EVVGANPTALE AIK++
Sbjct:   48 RFFSATMGKEGVHNLGSKADFDSALSEPGLMVLDCFATWCGPCKVIAPQVVKFSNTYTDTRFYKLDVDEIPDVAQELSVRAMPTFIIFKDGQKVGEVVGANPTALEAAIKQN 159

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A1V8TDX6_9PEZI (Thioredoxin n=2 Tax=Rachicladosporium antarcticum TaxID=1507870 RepID=A0A1V8TDX6_9PEZI)

HSP 1 Score: 180 bits (457), Expect = 5.370e-56
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 0

Query:   60 MAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            M KEGVHNL SKADFDSA+ E GL+VLDCFATWCGPCKVIAPQVVKFS+ + D  FYKLDVDE+P+VAQEL+VRAMPTF++FKDG+KV EVVGANPTALE AIK++
Sbjct:    1 MGKEGVHNLASKADFDSALGEPGLMVLDCFATWCGPCKVIAPQVVKFSNTYTDTRFYKLDVDEIPDVAQELSVRAMPTFIIFKDGQKVGEVVGANPTALEAAIKQN 106

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A1Y2A7I8_9PLEO (Thioredoxin n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y2A7I8_9PLEO)

HSP 1 Score: 180 bits (456), Expect = 9.820e-56
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 0

Query:   60 MAKEGVHNLQSKADFDSAMKEQG-LIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            M KEGVHNL  KA+FD A+K +G LIVLDCFATWCGPCKVIAPQVVKFS  +P A FYKLDVDEVP+VAQEL +RAMPTFLLFKDGEKV EVVGANP ALE AIKKH
Sbjct:    1 MGKEGVHNLSKKAEFDEALKVKGQLIVLDCFATWCGPCKVIAPQVVKFSDTYPTARFYKLDVDEVPDVAQELGIRAMPTFLLFKDGEKVSEVVGANPKALEAAIKKH 107

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A2K1QTB8_9PEZI (Thioredoxin n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QTB8_9PEZI)

HSP 1 Score: 178 bits (452), Expect = 3.000e-55
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 0

Query:   60 MAKEGVHNLQSKADFDSAMKE-QGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            MAK+GVHNLQ+KA+FD AM++ + L+VLDCFATWCGPCKVIAPQVVKFS  +P+A FYKLDVDEVP+VAQEL +RAMPTFLLFK GEKVEEVVGANP ALE AI+KH
Sbjct:    1 MAKQGVHNLQAKAEFDKAMEDKETLMVLDCFATWCGPCKVIAPQVVKFSDTYPNARFYKLDVDEVPDVAQELGIRAMPTFLLFKGGEKVEEVVGANPKALEAAIQKH 107

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A6G1HC32_9PEZI (Thioredoxin-domain-containing protein n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1HC32_9PEZI)

HSP 1 Score: 177 bits (450), Expect = 3.070e-54
Identity = 82/112 (73.21%), Postives = 95/112 (84.82%), Query Frame = 0

Query:   54 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            + F   MA+EGVHNL SKADFD A+ E+G++VLDCFATWCGPCK IAPQVVK+S  +P A FYKLDVDEVP+VAQEL +RAMPTF++FKDGEK +EVVGANP ALE AIK H
Sbjct:   41 KYFYSTMAEEGVHNLMSKADFDKALGEKGVMVLDCFATWCGPCKTIAPQVVKYSKAYPSARFYKLDVDEVPDVAQELGIRAMPTFIVFKDGEKSKEVVGANPKALEAAIKDH 152

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A6A6BJH5_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Aplosporella prunicola CBS 121167 TaxID=1176127 RepID=A0A6A6BJH5_9PEZI)

HSP 1 Score: 176 bits (446), Expect = 1.130e-53
Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = 0

Query:   54 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            R F+ ++ K GVHNLQ+K ++D+A+KE  L+VLDCFATWCGPCKVIAPQVVKFS  +P A FYKLDVDE+P+VAQEL +RAMPTFLLFK GEKV EVVGANP ALE AIK+H
Sbjct:   40 RTFTTSIRKMGVHNLQTKTEWDNALKEPELVVLDCFATWCGPCKVIAPQVVKFSEAYPTAKFYKLDVDEIPDVAQELGIRAMPTFLLFKGGEKVGEVVGANPKALEAAIKQH 151

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A1J9RG75_9PEZI (Thioredoxin n=1 Tax=Diplodia corticola TaxID=236234 RepID=A0A1J9RG75_9PEZI)

HSP 1 Score: 176 bits (446), Expect = 1.280e-53
Identity = 91/139 (65.47%), Postives = 107/139 (76.98%), Query Frame = 0

Query:   34 RLAASSSIPTTRSTFSVTPI-------RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            RL A  S     S FSVT +       RLF  + ++ GVHNL +K ++DSA++E  L+VLDCFATWCGPCKVIAPQ+VKFS  FP+A FYKLDVDEVP+VAQEL +RAMPTFLLFK GEKV EVVGANP ALETAI++H
Sbjct:   18 RLRAPVSTAARPSPFSVTRVQPSIRSTRLFQSSASRMGVHNLANKTEWDSALQEPELVVLDCFATWCGPCKVIAPQLVKFSEAFPNAKFYKLDVDEVPDVAQELGIRAMPTFLLFKGGEKVGEVVGANPKALETAIRQH 156

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: R7YGT3_CONA1 (Thioredoxin n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YGT3_CONA1)

HSP 1 Score: 174 bits (441), Expect = 1.510e-53
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   60 MAKEGVHNLQSKADFDSAMKEQG-LIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            M K+GVHNLQ+KA+FD AM ++  L+VLDCFATWCGPCKVIAPQVVKFS  +PDA FYKLDVDEVPEVAQEL +RAMPTFLLFK+GEKV EVVGANP ALE AIK +
Sbjct:    1 MGKQGVHNLQTKAEFDQAMTDKDTLMVLDCFATWCGPCKVIAPQVVKFSDAYPDARFYKLDVDEVPEVAQELGIRAMPTFLLFKNGEKVGEVVGANPKALEAAIKSN 107

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BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match: A0A6A6ADD9_9PLEO (Thioredoxin n=1 Tax=Dothidotthia symphoricarpi CBS 119687 TaxID=1392245 RepID=A0A6A6ADD9_9PLEO)

HSP 1 Score: 174 bits (440), Expect = 2.070e-53
Identity = 78/106 (73.58%), Postives = 96/106 (90.57%), Query Frame = 0

Query:   60 MAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 165
            M  EGVHNLQ+K+ FD+A++E+GL+++DCFATWCGPCKVIAP +VK++S F +A FYKLDVDEVP+VAQEL +RAMPTFLLFKDG +V+EVVGANP+ALE AIKKH
Sbjct:    1 MGHEGVHNLQTKSAFDAALEEKGLLIVDCFATWCGPCKVIAPVIVKYASAFSNARFYKLDVDEVPDVAQELGIRAMPTFLLFKDGVRVQEVVGANPSALEAAIKKH 106

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A150V1F1_9PEZI	5.820e-60	80.36	Thioredoxin domain-containing protein n=1 Tax=Acid...	[more]
A0A1V8U4R0_9PEZI	1.530e-57	77.68	Thioredoxin n=2 Tax=Rachicladosporium sp. CCFEE 50...	[more]
A0A1V8TDX6_9PEZI	5.370e-56	79.25	Thioredoxin n=2 Tax=Rachicladosporium antarcticum ...	[more]
A0A1Y2A7I8_9PLEO	9.820e-56	81.31	Thioredoxin n=1 Tax=Clohesyomyces aquaticus TaxID=...	[more]
A0A2K1QTB8_9PEZI	3.000e-55	79.44	Thioredoxin n=1 Tax=Sphaceloma murrayae TaxID=2082...	[more]
A0A6G1HC32_9PEZI	3.070e-54	73.21	Thioredoxin-domain-containing protein n=1 Tax=Aulo...	[more]
A0A6A6BJH5_9PEZI	1.130e-53	73.21	Thioredoxin domain-containing protein n=1 Tax=Aplo...	[more]
A0A1J9RG75_9PEZI	1.280e-53	65.47	Thioredoxin n=1 Tax=Diplodia corticola TaxID=23623...	[more]
R7YGT3_CONA1	1.510e-53	78.50	Thioredoxin n=1 Tax=Coniosporium apollinis (strain...	[more]
A0A6A6ADD9_9PLEO	2.070e-53	73.58	Thioredoxin n=1 Tax=Dothidotthia symphoricarpi CBS...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 131..142 score: 43.47 coord: 84..92 score: 35.37 coord: 92..101 score: 67.67
None	No IPR available	GENE3D	3.40.30.10		coord: 57..166 e-value: 4.4E-35 score: 121.9
None	No IPR available	PANTHER	PTHR46115	FAMILY NOT NAMED	coord: 65..166
None	No IPR available	PANTHER	PTHR46115:SF1	THIOREDOXIN-LIKE PROTEIN 1	coord: 65..166
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..166
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..19
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 70..163 e-value: 1.5E-26 score: 92.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 47..166 score: 12.091
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 85..103
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 64..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig1006	contig	P-canaliculata_contig1006:991..1568 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig1006.125.1	mRNA_P-canaliculata_contig1006.125.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig1006 865..1762 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig1006.125.1 ID=prot_P-canaliculata_contig1006.125.1|Name=mRNA_P-canaliculata_contig1006.125.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=167bp
MSRFIRTSTSRTLLTTTLCRTIHSPTAATNPSRRLAASSSIPTTRSTFSV
TPIRLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIA
PQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEV
VGANPTALETAIKKHS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS
IPR036249	Thioredoxin-like_sf