prot_P-canaliculata_contig100216.77.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100216.77.1
Unique Nameprot_P-canaliculata_contig100216.77.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length117
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100216.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..84
e-value: 2.3E-8
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100216contigP-canaliculata_contig100216:346..696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100216.77.1mRNA_P-canaliculata_contig100216.77.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100216 346..696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100216.77.1 ID=prot_P-canaliculata_contig100216.77.1|Name=mRNA_P-canaliculata_contig100216.77.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=117bp
TSVTRPVSVTNPGAETVTISSVQTSPPFSFTGALPITIPGRSSRSFPLVF
SPITTGSSTVNLKLSTEELGDPPTIVTLSGTGTPAPSISISQSGFNETVA
LGTGEFTRTITLTNTGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold