mRNA_P-canaliculata_contig9984.24101.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig9984.24101.1 vs. uniprot
Match: A0A6H5LAW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW1_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 3.130e-108
Identity = 187/344 (54.36%), Postives = 242/344 (70.35%), Query Frame = 3

Query:  198 VMAGPNRGQKPTFFEDWPVLEAEIRSYLAEREAGDPKDQDNGGKDT--AGKAVLNFLSIDPSGMEQGGTGERDEWDGEPDILTYSELTRYGYEYLVEPMMKAGGYTVISTRMGIDLNTRTLKDKEYYQKSSPSVA---EEKRDTDGFLTLGRAREERLDAAAKIDREKRRKTLFEKQAMMDGTRREDLLTSKVSKVL----------GSGDKNDPGDDLRRPPGLSSGPRGPTLWRAPEKAKGPQP-ESVLFSLPQRANAVAVAACCALAYGRGTAQALEQGLISQDFVNVAVPGSLLLLGLNAASAVAGGSIAKKKRRSVPLWVFKGLFAGVPSILELQGLPD 1181
            +MAGPN+GQKP FF +WPVLEAEIR+YL ER+AGDP+ +  GG ++  AG  +LNFLS++P+ M      +RDEWDGE ++L+YSELTRYGY YL+EPMMK GGY   S RMGIDLN RTLKD EYY++++P+V    ++K D DGFLTLG A+EERL++ A + RE RRK+LFEKQAMMD   +     +K S+VL          G   + +  +++ R PGL++  R  + W    +A+   P + +L +  QRANAVAV  C +LA+G+GT  ALE GL+ +D    AVP SL LLGLN ASAVAG SIAK K RSVPLWVFKG  AG+ S+LEL+GLP+
Sbjct:   73 MMAGPNQGQKPGFFAEWPVLEAEIRAYLDERQAGDPE-KGGGGVESKGAGGTLLNFLSVNPTQMALENEPDRDEWDGEVNVLSYSELTRYGYGYLIEPMMKIGGYVAASERMGIDLNARTLKDNEYYERTNPTVGLDIQKKADKDGFLTLGSAKEERLNSVANVSREDRRKSLFEKQAMMDKKTKAKKAATKKSRVLNTSRKVPVNLGGRSQKEVDEEIFRKPGLTAEQRDISEWVPEVRAEDALPAQPLLLNFAQRANAVAVCGCLSLAFGKGTLDALETGLLPRDVAEAAVPASLFLLGLNVASAVAGASIAKNKGRSVPLWVFKGALAGLTSVLELKGLPE 415

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BLAST of mRNA_P-canaliculata_contig9984.24101.1 vs. uniprot
Match: A0A835Z3J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.140e-27
Identity = 92/263 (34.98%), Postives = 126/263 (47.91%), Query Frame = 3

Query:  411 EWDGEPDILTYSELTRYGYEYLVEPMMKAGGYTVISTRMGIDLNTRTLKDKEYYQKSS-PSVAEEKRDTDGFLTLGRAREERLDAAAKIDREK---RRKTLFEKQAMMDG----TRREDLLTSKVSKVLGSGDKNDPGDDLRRPPGLSSGPRGPTLWRAPEKAKGPQPESVLFSLPQRANAVAVAACCALAYGRGTAQALEQGLISQDFVNVAVPGSLLLLGLNAASAVAGGSIAKKKRRSVPLWVFKGLFAGVPSILELQGL 1175
            EWDG PD L YSEL  YGY+YLVEP+M AGGY  +S R+G+ +  ++ + +  +     P +       +GFL LG A +ER++AAA    ++   R   LFEKQA+MD      RR+    + V +              R  P + +             A     E +  S  QRA  +A A   A+ +GRGT  A++ GL        A  G  LLL  NA SAV    +A +  R V  W  KG  AG  S+ EL+GL
Sbjct:   30 EWDGAPDPLEYSELRAYGYQYLVEPIMNAGGYIAVSNRLGVHVTPKSRRRRAAFAPGEEPKLLRPSDAKEGFLALGSALDERMEAAAAAAPQRAAERSARLFEKQALMDADERAARRDAAEAAPVYR--------------RAAPEVVAARAAXXXXXDXADAAALPRERIGLSALQRAYVLATAVSAAVGFGRGTPAAVDVGLPEAAVQAAAAVGFALLLA-NAGSAVLSARMASRGGRGVVHWALKGALAGPVSVAELRGL 277

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BLAST of mRNA_P-canaliculata_contig9984.24101.1 vs. uniprot
Match: B5YNF0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNF0_THAPS)

HSP 1 Score: 71.2 bits (173), Expect = 1.880e-9
Identity = 95/326 (29.14%), Postives = 138/326 (42.33%), Query Frame = 3

Query:  255 LEAEIRSYLAEREAG--DPKDQDNGGK---DTAGKAVLNFLSIDPSGMEQGGTGERDEWDGEPDILTYSELTRYGYEYLVEPMMKAGGYTVISTRMGIDLNTRTLKDKEYYQKSSPSVAEEKRDTDGFLTLGRAREERLDAAAKIDREKRRKTLFE---KQAMMDGTRREDLLTSKVSKVLGSGDKNDPGDDLRRPPGLSSGPRGP---TLW----RAPEKAKGPQPESVLFSLPQRANAVAVAACCALAYGRGTAQALEQ-GLISQDFVNVAVPGSLLLLGLNAASAVAGGSI-AKKKRRSVPLWVFKGLFAGVPSILELQGLPD 1181
            L+ E+  YL +RE    D   +   GK    T G  VL+F+S  P+        ++   +  PD+  Y ELT+YGY YLV P+MK GG   +   M  +L      ++   +KS+P +       D      +AR   L  +A +D +   K L E   K    +  R++ +    V     + +K      L  P  L    R       W    R  E  K P  E +      R  ++ VA   ALA+G  T  AL   G+ S D ++V    +L LL     S +    + A  KRRS  +W  KGLF G  SI +L+ L D
Sbjct:   82 LKVELAEYLRKREEANADEAAKSEVGKVIGGTRGNIVLDFVSGSPN--------KQRVQEEAPDVFDYDELTKYGYSYLVTPIMKNGGRRAMYQLM--NLPEPATPERLTKKKSAPKLV-----IDRTGETDKARYTGLKMSAAMDDDAMGKALEEAARKVKQGESLRKKLVEEDYVLPYADNTNKGPRQTPLWTPEKLDEAGRKAGEAQAWARKARMGELKKDPF-EILAVEGELRVYSIVVAFTVALAFGNATPTALRMLGVGSDDMLDVFRVPALALLAAGFGSCLMNALVLAPPKRRSSFVWGLKGLFGGPLSIRQLRELDD 391

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9984.24101.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9984.24101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5LAW1_9PHAE	3.130e-108	54.36	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z3J1_9STRA	1.140e-27	34.98	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
B5YNF0_THAPS	1.880e-9	29.14	Predicted protein n=1 Tax=Thalassiosira pseudonana...	[more]