mRNA_P-canaliculata_contig99783.24095.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig99783.24095.1
Unique NamemRNA_P-canaliculata_contig99783.24095.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A3M2SUG7_9EURO (HlyD_D23 domain-containing protein n=5 Tax=cellular organisms TaxID=131567 RepID=A0A3M2SUG7_9EURO)

HSP 1 Score: 472 bits (1215), Expect = 2.790e-164
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNV+LTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY
Sbjct:   60 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVQLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 392          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: UPI0018EF2004 (HlyD family secretion protein n=1 Tax=Jiella sp. R10 TaxID=2606717 RepID=UPI0018EF2004)

HSP 1 Score: 303 bits (777), Expect = 1.360e-97
Identity = 220/334 (65.87%), Postives = 254/334 (76.05%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLG-ELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  TDR APY+ R + +AY+AQIAPRV+GQVTEV V+DN IVN+G+PLF+LD R FE+AVRQAEAN                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG + G+  P I AAQ  LE+AQ +LL +TV AP LGVVTN++L  GQY AAG PG+TF+D++G W+ AD RENQL  V PGD VG+LFD +PG I+ GR+ S++WGIDPGR + GGL QN PE RWFEPARRMPVRIEL+GGM+AWP   RAG KVS V+Y+     PIAWIA  +H  QS  SYLY
Sbjct:   81 YAVTDRTAPYTGRASASAYVAQIAPRVAGQVTEVFVEDNTIVNAGDPLFQLDRRAFELAVRQAEANLAQAMQATDVSAAGVASAQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGGDNGEPAPNILAAQLQLEEAQLNLLYSTVTAPTLGVVTNLQLAIGQYAAAGTPGMTFIDSRGGWITADLRENQLGLVAPGDEVGILFDVMPGRIYTGRVHSVAWGIDPGRTTAGGLMQNLPENRWFEPARRMPVRIELDGGMEAWPRQARAGAKVSVVVYSGGTSNPIAWIAAGLHRAQSYLSYLY 414          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A1W2D2P8_9RHOB (Multidrug resistance efflux pump n=2 Tax=Primorskyibacter TaxID=1068904 RepID=A0A1W2D2P8_9RHOB)

HSP 1 Score: 300 bits (768), Expect = 6.290e-97
Identity = 226/333 (67.87%), Postives = 261/333 (78.38%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y   DR+AP SSRG V+AY+ QIAPRVSG+VT+VLV D+A+V +G+PLF +DSRPFE+AVRQAEAN             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG  G+DNP I  A+  LE+AQYDL STTV AP LGVVTNV L+ GQ++ AGNP LTF+DA+ AW+  D RENQL  +  GD   LLFDA+PG IF GR+ S++WGI+PGR   GGL  NQP  RWFEPARR+PVRIE++GGM+ WP  VR GGKV AV++ Q D GPIA IA  M  ++S FSYL+
Sbjct:   31 YALADRMAPSSSRGIVSAYVVQIAPRVSGEVTDVLVDDDAVVQAGDPLFAIDSRPFELAVRQAEANLETALQNVNASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGPQGKDNPAILGAEAQLEKAQYDLASTTVTAPHLGVVTNVTLSEGQFIGAGNPALTFIDAEAAWITVDLRENQLQGIGAGDSAHLLFDALPGQIFEGRVQSVAWGINPGRNVQGGLVVNQPSNRWFEPARRIPVRIEIDGGMENWPRAVRVGGKVHAVVFAQSDTGPIALIARGMQRLRSWFSYLH 363          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: UPI0009FCCE0E (HlyD family secretion protein n=1 Tax=Halomonas halodenitrificans TaxID=28252 RepID=UPI0009FCCE0E)

HSP 1 Score: 298 bits (762), Expect = 1.340e-95
Identity = 207/333 (62.16%), Postives = 245/333 (73.57%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  +DRLAP SSRG V+A++A+IAPRVSGQVTE+LV+DNA+V +G+PLF +D RPF++AVRQA+AN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXLG  G+DNP I AA+  LEQAQYDL STTV AP  GV+TNV L+ GQ+++AGNP +TF+DA+ AWV  D RENQL N+ PGD   +LFDAVPGTI+ GR+ SI+WGI+PGR +  GL  +QP  RWFEPARR+PVRIEL GGM+ WP  VR GGKV   + T D   PI WIA  +  +QS  SYL+
Sbjct:   62 YALSDRLAPSSSRGIVSAHVARIAPRVSGQVTEILVEDNAVVEAGDPLFAIDDRPFQLAVRQAQANLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKADRMLRLEQRGVISVDKADDARAQLAXXXXXXXXXXXXXXXXXXXLGSQGEDNPAILAAESKLEQAQYDLTSTTVKAPHFGVITNVTLSEGQFISAGNPAMTFIDARAAWVTVDLRENQLQNLDPGDTARVLFDAVPGTIYEGRVQSIAWGINPGRNTQEGLVVSQPNNRWFEPARRIPVRIELAGGMEDWPKQVRVGGKVDVTVLTGDSGNPITWIARGLQRLQSWASYLH 394          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A4R7LT20_9RHOB (Multidrug resistance efflux pump n=1 Tax=Litoreibacter halocynthiae TaxID=1242689 RepID=A0A4R7LT20_9RHOB)

HSP 1 Score: 296 bits (759), Expect = 1.440e-95
Identity = 188/333 (56.46%), Postives = 219/333 (65.77%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  TDR+AP SSRG V+A++ QIAPRVSG+VT V + D+A+V +G+PLF LD RP E+A++QAEAN                XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    LG  G DNP I AAQ  LE+AQYDL S TV+AP LGVVTNV L  GQ++ AGNP LTF+DA  AWV  D RENQL NV+  D+VGLLFDAVPG IF GR+ SI+WGI+PGR   GGL  NQP  RWFEPARR+PVR+EL  GM+AWP NVR GGKV AV+Y      PIAW++ A   +QS  SYL+
Sbjct:   31 YAMTDRMAPSSSRGIVSAHVVQIAPRVSGEVTRVHIADDAVVQAGDPLFSLDPRPLELALQQAEANLTSTIQNIDASGASLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLATTSAGDTARGQVADAETRLAAAEANLESARTQLGSQGNDNPAIAAAQAQLERAQYDLNSATVLAPHLGVVTNVLLAEGQFIGAGNPALTFIDADAAWVTVDLRENQLQNVQADDKVGLLFDAVPGQIFDGRVQSIAWGINPGRNIQGGLVVNQPSNRWFEPARRIPVRVELVDGMEAWPANVRVGGKVHAVVYASGKGNPIAWLSGAFQRIQSLTSYLH 363          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A1H1MUD6_9GAMM (Multidrug resistance efflux pump n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1H1MUD6_9GAMM)

HSP 1 Score: 296 bits (757), Expect = 5.230e-95
Identity = 187/333 (56.16%), Postives = 229/333 (68.77%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            YV TDR+APY+ RGAVA Y+AQ+ PRV+GQVT+V VQD  IV +G PLF+LD+RPFE+AVRQAEA+               XXXXXXXXXXXXXXXXXXXX                          XXXXXXXXXXXXXX     LGE G +NP I+A          DL  TTV AP  GV+TN++L  GQY++ G P +TF DA+GAW+ AD RENQL NV+PGD+V +LFDAVPG +F+GR+ SI+WGIDPGR S GGL QNQPE+ WFEPARRMPV++ELE G+  WP +VRAGGKVS V+Y      P+AW+++ + H+++  SYLY
Sbjct:   50 YVVTDRMAPYTPRGAVAGYVAQLTPRVAGQVTQVYVQDGDIVEAGTPLFQLDARPFELAVRQAEASLAQTIQATDASAAGIXXXXXXXXXXXXXXXXXXXXSSRTLELVRRGVMSEMQGDDARAELRXXXXXXXXXXXXXXSAMLALGESGMENPDIRAXXXXXXXXXXDLEFTTVTAPTRGVITNMQLAIGQYVSPGTPAMTFFDARGAWITADLRENQLGNVEPGDQVQILFDAVPGKLFNGRVKSIAWGIDPGRPSAGGLMQNQPESEWFEPARRMPVQVELENGLKDWPRSVRAGGKVSVVVYASGTSNPVAWLSSLLLHIRAYLSYLY 382          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: UPI001582E6FB (HlyD family secretion protein n=1 Tax=Sulfitobacter maritimus TaxID=2741719 RepID=UPI001582E6FB)

HSP 1 Score: 294 bits (753), Expect = 1.160e-94
Identity = 230/333 (69.07%), Postives = 259/333 (77.78%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  TDR+AP SSRG V+A++ QIAPRVSG+V  V VQD+A+V +G+PLF++D RPFE+AV+QAEAN         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LG  GQDNP I AAQ  LE+AQYDL ST + AP  GVVTNV L  GQ++ AGNP LTF+DA  AWV  D RENQL  +  GD VGLLFDAVPG I  GR+ SI+WGI+PGR   GGL  NQP  RWFEPARR+PVRIEL GGM+ WP  VR GGKV+AVIY +    PIAW A A+  V+S  SYL+
Sbjct:   31 YTLTDRMAPSSSRGIVSAHVVQIAPRVSGEVLRVQVQDDAVVQAGDPLFQIDPRPFELAVKQAEANLTSTVQNIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLGSQGQDNPAILAAQAQLERAQYDLASTQIRAPHYGVVTNVLLAEGQFVGAGNPALTFIDADAAWVTVDLRENQLQEIDAGDEVGLLFDAVPGEILEGRVQSIAWGINPGRNVQGGLVVNQPSNRWFEPARRIPVRIELLGGMEQWPHKVRVGGKVNAVIYAEGRGNPIAWFAGALQRVKSITSYLH 363          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A2T0X9Y8_9RHOB (Multidrug resistance efflux pump n=1 Tax=Hasllibacter halocynthiae TaxID=595589 RepID=A0A2T0X9Y8_9RHOB)

HSP 1 Score: 290 bits (743), Expect = 4.110e-93
Identity = 212/333 (63.66%), Postives = 244/333 (73.27%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  TDRLAP SSRG V+A + Q+APRVSG+V  V V+D+A+V +G PLF +D RPFE+AVRQAEAN                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LG  G+DNP I AAQ      QYDL STTV AP  GVVTNV L+ GQ+++AG+P LTF+DA+ AW+  D RENQL  V  GD VGL+FDAVPG IF GR+ SI+WGI+PGR   GGL  NQP  RWFEPARR+PVRIEL GGMDAWP   R GGKV  V+Y    DGP+AW+A+A+  ++S  SYL+
Sbjct:   34 YAMTDRLAPASSRGIVSAQVVQVAPRVSGEVVAVRVEDDAVVRTGAPLFEIDPRPFELAVRQAEANLENTVQGIDASGASLVSAQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQLGSGGEDNPAIAAAQXXXXXXQYDLASTTVTAPHFGVVTNVTLSEGQFVSAGSPALTFIDAEAAWITLDLRENQLQLVDAGDPVGLVFDAVPGEIFEGRVQSIAWGINPGRNVAGGLVVNQPTNRWFEPARRIPVRIELAGGMDAWPERARVGGKVHGVVYAGGTDGPVAWMASALQRLRSWTSYLH 366          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: UPI000C181E2C (HlyD family secretion protein n=1 Tax=Oceaniglobus indicus TaxID=2047749 RepID=UPI000C181E2C)

HSP 1 Score: 286 bits (733), Expect = 1.290e-91
Identity = 219/333 (65.77%), Postives = 255/333 (76.58%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  +DR+AP SSRG V+A++ QIAPRVSG+VT+V+V+D+A+V +G+PLF +D+RPF++AV QAEAN                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLG    +NP I AAQ  LE+AQYDL ST V AP  GVVTNV L+SGQ++ AGNP LTF+DA  AWV  D RENQL  VK GD   LLFDAVPG IF GR+ SI+WGI+PGR   GGL  NQP  RWFEPARR+PVRIE+EGGMDAWP   R GGKV AV++   +  P+AWIA  +  ++S  SYL+
Sbjct:   33 YALSDRIAPSSSRGIVSAHVVQIAPRVSGEVTQVMVKDDAVVQAGDPLFSIDTRPFDLAVAQAEANLTSTVQGIDASAASLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPQNAENPAILAAQAGLERAQYDLASTMVRAPHYGVVTNVSLSSGQFVGAGNPALTFIDADTAWVTVDLRENQLQAVKAGDPANLLFDAVPGKIFKGRVQSIAWGINPGRNVQGGLVVNQPTNRWFEPARRIPVRIEVEGGMDAWPRPARVGGKVHAVVFAGGEGHPLAWIAATLQRIRSVTSYLH 365          
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Match: A0A831R2X0_9GAMM (HlyD family secretion protein n=3 Tax=root TaxID=1 RepID=A0A831R2X0_9GAMM)

HSP 1 Score: 286 bits (732), Expect = 1.760e-91
Identity = 173/333 (51.95%), Postives = 203/333 (60.96%), Query Frame = 1
Query:    1 YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY 999
            Y  +DRLAP SSRG V+A++ QIAPRVSG +TEV+V D+A+V +G+PLF LD+RPFE+AVRQAEAN                                                               XXXXXXXXXXXXXXXX LG  G DNP I AAQ  LE AQYDL STTV AP  GVVTN+ L  GQ++ AGNP LTF+DA  AWV  D RENQL  ++PGD   LLFDAVPGT+F G + SI+WGI+PGR   GGL  N+   RWFEPARR+PVRIEL G  D WP  VR GGKV+AV++      PIA +A  +  V+S FSYLY
Sbjct:   32 YALSDRLAPSSSRGFVSAHVVQIAPRVSGDITEVMVADDAVVQAGDPLFALDARPFELAVRQAEANLANTVQGIDASAASLVSAQAVVTQARTSLGTARTEADRTLRLEKRGIIPVAQGDTARAKVADAXXXXXXXXXXXXXXXXQLGPRGADNPSILAAQAKLESAQYDLASTTVRAPHFGVVTNMTLAEGQFINAGNPALTFIDADAAWVTVDLRENQLQGIEPGDPAHLLFDAVPGTLFDGHVQSIAWGINPGRNVQGGLVVNEASNRWFEPARRIPVRIELNGTQDDWPRQVRVGGKVNAVVFASGTGNPIALLARGLQRVKSWFSYLY 364          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99783.24095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M2SUG7_9EURO2.790e-16499.70HlyD_D23 domain-containing protein n=5 Tax=cellula... [more]
UPI0018EF20041.360e-9765.87HlyD family secretion protein n=1 Tax=Jiella sp. R... [more]
A0A1W2D2P8_9RHOB6.290e-9767.87Multidrug resistance efflux pump n=2 Tax=Primorsky... [more]
UPI0009FCCE0E1.340e-9562.16HlyD family secretion protein n=1 Tax=Halomonas ha... [more]
A0A4R7LT20_9RHOB1.440e-9556.46Multidrug resistance efflux pump n=1 Tax=Litoreiba... [more]
A0A1H1MUD6_9GAMM5.230e-9556.16Multidrug resistance efflux pump n=2 Tax=Gammaprot... [more]
UPI001582E6FB1.160e-9469.07HlyD family secretion protein n=1 Tax=Sulfitobacte... [more]
A0A2T0X9Y8_9RHOB4.110e-9363.66Multidrug resistance efflux pump n=1 Tax=Hasllibac... [more]
UPI000C181E2C1.290e-9165.77HlyD family secretion protein n=1 Tax=Oceaniglobus... [more]
A0A831R2X0_9GAMM1.760e-9151.95HlyD family secretion protein n=3 Tax=root TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99783contigP-canaliculata_contig99783:37..1038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score290.0
Seed ortholog evalue1.4e-75
Seed eggNOG ortholog375451.RD1_3593
Preferred nameVVA0148
KEGG koko:K03543
KEGG TC8.A.1.1
KEGG ModuleM00701
EggNOG free text desc.Barrel-sandwich domain of CusB or HlyD membrane-fusion
EggNOG OGs1MU7I@1224,2P504@2433,2TS39@28211,COG1566@1,COG1566@2
COG Functional cat.V
Best tax levelRoseobacter
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size1002
Cds size1002
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817357.101333-CDS-P-canaliculata_contig99783:36..10381622817357.101333-CDS-P-canaliculata_contig99783:36..1038Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99783 37..1038 -
1693495244.737932-CDS-P-canaliculata_contig99783:36..10381693495244.737932-CDS-P-canaliculata_contig99783:36..1038Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99783 37..1038 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99783.24095.1prot_P-canaliculata_contig99783.24095.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig99783 37..1038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig99783.24095.1

>prot_P-canaliculata_contig99783.24095.1 ID=prot_P-canaliculata_contig99783.24095.1|Name=mRNA_P-canaliculata_contig99783.24095.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=334bp
YVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFR
LDSRPFEIAVRQAEANLAQATQSIDASSASLVASQAQVAQARANLDNIRA
AAERTLALVERGISSGAQRDAAEADLRTAEAQFSTAEANLRSAEAQLGEL
GQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVKLTSGQYLAAGNP
GLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSIS
WGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGG
KVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY*
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mRNA from alignment at P-canaliculata_contig99783:37..1038-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99783.24095.1 ID=mRNA_P-canaliculata_contig99783.24095.1|Name=mRNA_P-canaliculata_contig99783.24095.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at P-canaliculata_contig99783:37..1038- (Pelvetia canaliculata dioecious)
TACGTGGCCACTGATCGTCTAGCACCCTATTCTTCGCGCGGGGCGGTCGC CGCTTATATTGCGCAGATCGCACCGCGAGTTTCCGGGCAGGTGACGGAAG TCCTGGTTCAGGACAACGCCATCGTCAATTCGGGTGAACCGCTCTTCCGC CTCGACAGCCGGCCTTTCGAAATCGCCGTCCGTCAGGCCGAGGCCAATCT CGCACAAGCGACTCAGTCGATCGACGCGTCCTCCGCATCTCTCGTCGCGT CACAGGCGCAAGTGGCTCAGGCAAGAGCAAATCTTGACAACATTCGAGCT GCAGCGGAGCGGACCCTGGCTTTGGTGGAGCGCGGGATATCGTCAGGTGC ACAGCGTGATGCGGCCGAAGCCGATTTACGCACGGCGGAAGCCCAGTTTA GCACGGCGGAGGCGAACCTTCGCAGCGCCGAAGCACAACTCGGGGAACTG GGGCAGGACAACCCACAGATTCAGGCCGCGCAGTTCGCCTTGGAACAGGC GCAGTACGACCTCCTGTCGACAACGGTCGTCGCGCCTGGGCTGGGCGTCG TCACGAATGTTAAGCTGACGTCCGGTCAGTATCTGGCCGCCGGCAACCCG GGCCTCACCTTCCTGGATGCACAAGGCGCTTGGGTTGTTGCGGACTTTCG TGAGAACCAGCTTGCCAACGTCAAGCCTGGAGATCGCGTCGGCCTTTTGT TCGATGCCGTCCCCGGTACGATTTTTCATGGCCGCCTCGACAGCATTTCC TGGGGCATCGATCCGGGGCGCGCCAGTGTGGGCGGCTTACCGCAGAACCA ACCCGAGACGCGCTGGTTCGAGCCGGCCCGGCGCATGCCTGTACGCATCG AACTCGAAGGCGGCATGGATGCCTGGCCGGTGAATGTACGAGCGGGCGGC AAGGTCAGCGCGGTGATCTACACTCAGGACGACGACGGTCCGATAGCTTG GATCGCCAACGCGATGCACCATGTCCAGTCCACCTTCTCGTACCTCTACT GA
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Coding sequence (CDS) from alignment at P-canaliculata_contig99783:37..1038-

>mRNA_P-canaliculata_contig99783.24095.1 ID=mRNA_P-canaliculata_contig99783.24095.1|Name=mRNA_P-canaliculata_contig99783.24095.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at P-canaliculata_contig99783:37..1038- (Pelvetia canaliculata dioecious)
TACGTGGCCACTGATCGTCTAGCACCCTATTCTTCGCGCGGGGCGGTCGC
CGCTTATATTGCGCAGATCGCACCGCGAGTTTCCGGGCAGGTGACGGAAG
TCCTGGTTCAGGACAACGCCATCGTCAATTCGGGTGAACCGCTCTTCCGC
CTCGACAGCCGGCCTTTCGAAATCGCCGTCCGTCAGGCCGAGGCCAATCT
CGCACAAGCGACTCAGTCGATCGACGCGTCCTCCGCATCTCTCGTCGCGT
CACAGGCGCAAGTGGCTCAGGCAAGAGCAAATCTTGACAACATTCGAGCT
GCAGCGGAGCGGACCCTGGCTTTGGTGGAGCGCGGGATATCGTCAGGTGC
ACAGCGTGATGCGGCCGAAGCCGATTTACGCACGGCGGAAGCCCAGTTTA
GCACGGCGGAGGCGAACCTTCGCAGCGCCGAAGCACAACTCGGGGAACTG
GGGCAGGACAACCCACAGATTCAGGCCGCGCAGTTCGCCTTGGAACAGGC
GCAGTACGACCTCCTGTCGACAACGGTCGTCGCGCCTGGGCTGGGCGTCG
TCACGAATGTTAAGCTGACGTCCGGTCAGTATCTGGCCGCCGGCAACCCG
GGCCTCACCTTCCTGGATGCACAAGGCGCTTGGGTTGTTGCGGACTTTCG
TGAGAACCAGCTTGCCAACGTCAAGCCTGGAGATCGCGTCGGCCTTTTGT
TCGATGCCGTCCCCGGTACGATTTTTCATGGCCGCCTCGACAGCATTTCC
TGGGGCATCGATCCGGGGCGCGCCAGTGTGGGCGGCTTACCGCAGAACCA
ACCCGAGACGCGCTGGTTCGAGCCGGCCCGGCGCATGCCTGTACGCATCG
AACTCGAAGGCGGCATGGATGCCTGGCCGGTGAATGTACGAGCGGGCGGC
AAGGTCAGCGCGGTGATCTACACTCAGGACGACGACGGTCCGATAGCTTG
GATCGCCAACGCGATGCACCATGTCCAGTCCACCTTCTCGTACCTCTACT
GATACGTGGCCACTGATCGTCTAGCACCCTATTCTTCGCGCGGGGCGGTC
GCCGCTTATATTGCGCAGATCGCACCGCGAGTTTCCGGGCAGGTGACGGA
AGTCCTGGTTCAGGACAACGCCATCGTCAATTCGGGTGAACCGCTCTTCC
GCCTCGACAGCCGGCCTTTCGAAATCGCCGTCCGTCAGGCCGAGGCCAAT
CTCGCACAAGCGACTCAGTCGATCGACGCGTCCTCCGCATCTCTCGTCGC
GTCACAGGCGCAAGTGGCTCAGGCAAGAGCAAATCTTGACAACATTCGAG
CTGCAGCGGAGCGGACCCTGGCTTTGGTGGAGCGCGGGATATCGTCAGGT
GCACAGCGTGATGCGGCCGAAGCCGATTTACGCACGGCGGAAGCCCAGTT
TAGCACGGCGGAGGCGAACCTTCGCAGCGCCGAAGCACAACTCGGGGAAC
TGGGGCAGGACAACCCACAGATTCAGGCCGCGCAGTTCGCCTTGGAACAG
GCGCAGTACGACCTCCTGTCGACAACGGTCGTCGCGCCTGGGCTGGGCGT
CGTCACGAATGTTAAGCTGACGTCCGGTCAGTATCTGGCCGCCGGCAACC
CGGGCCTCACCTTCCTGGATGCACAAGGCGCTTGGGTTGTTGCGGACTTT
CGTGAGAACCAGCTTGCCAACGTCAAGCCTGGAGATCGCGTCGGCCTTTT
GTTCGATGCCGTCCCCGGTACGATTTTTCATGGCCGCCTCGACAGCATTT
CCTGGGGCATCGATCCGGGGCGCGCCAGTGTGGGCGGCTTACCGCAGAAC
CAACCCGAGACGCGCTGGTTCGAGCCGGCCCGGCGCATGCCTGTACGCAT
CGAACTCGAAGGCGGCATGGATGCCTGGCCGGTGAATGTACGAGCGGGCG
GCAAGGTCAGCGCGGTGATCTACACTCAGGACGACGACGGTCCGATAGCT
TGGATCGCCAACGCGATGCACCATGTCCAGTCCACCTTCTCGTACCTCTA
CTGA
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