Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 747 |
| Cds size | 747 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817356.004757-CDS-P-canaliculata_contig99650:255..1002 | 1622817356.004757-CDS-P-canaliculata_contig99650:255..1002 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99650 256..1002 + |
| 1693495243.9742193-CDS-P-canaliculata_contig99650:255..1002 | 1693495243.9742193-CDS-P-canaliculata_contig99650:255..1002 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99650 256..1002 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99650.24080.1 >prot_P-canaliculata_contig99650.24080.1 ID=prot_P-canaliculata_contig99650.24080.1|Name=mRNA_P-canaliculata_contig99650.24080.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=249bp
VTTKRTKDRSAGIIPADRLLTLGVIAKSVLNRGAASFQRLLPNINWRRDV
AYLKRKGVLESKDGKLFVDPKTKRVMFSAEGFTDRVKAVWIDGLEKLKHH
PDALAELALHYIGTKESWKSAQLLIDSVRYVKPRFWDELYCDALERFDKD
LFRFIRESPISKVEIRHAVCQYKINLGEFEEGIVWAKKMRALARKPGFEK
WAAKSYLLTAECNRKLCQANEATRAYDHAIHIADNVKDDKSVLGNALFE back to topmRNA from alignment at P-canaliculata_contig99650:256..1002+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99650.24080.1 ID=mRNA_P-canaliculata_contig99650.24080.1|Name=mRNA_P-canaliculata_contig99650.24080.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=747bp|location=Sequence derived from alignment at P-canaliculata_contig99650:256..1002+ (Pelvetia canaliculata dioecious)
GTCACGACCAAAAGAACTAAGGATAGGTCGGCAGGCATCATCCCGGCCGA
TCGTCTTTTAACGCTAGGAGTGATTGCGAAAAGCGTTTTGAATCGGGGAG
CGGCGTCTTTCCAACGGCTGTTGCCGAACATCAATTGGCGAAGAGATGTG
GCGTACCTAAAACGGAAAGGAGTTCTTGAATCCAAAGACGGAAAGCTATT
CGTCGATCCAAAAACTAAACGAGTAATGTTTTCGGCCGAAGGCTTCACTG
ACCGTGTCAAGGCAGTCTGGATTGATGGCCTTGAAAAATTGAAGCATCAT
CCTGACGCATTGGCAGAACTGGCTCTCCACTATATCGGAACGAAAGAAAG
TTGGAAATCGGCTCAACTTTTGATTGATTCGGTGCGTTACGTTAAGCCTC
GATTTTGGGACGAACTCTATTGCGACGCACTTGAACGTTTTGACAAAGAC
CTTTTTCGCTTCATTCGCGAGTCACCCATTTCCAAAGTCGAAATTCGTCA
TGCTGTTTGCCAATACAAAATCAACCTTGGCGAATTTGAAGAAGGGATAG
TTTGGGCGAAGAAGATGCGCGCCTTGGCAAGAAAACCTGGTTTTGAAAAA
TGGGCCGCAAAGTCGTATTTACTCACGGCAGAGTGCAATCGAAAACTTTG
TCAAGCAAACGAAGCAACGCGCGCATACGACCATGCGATCCATATTGCAG
ATAACGTAAAAGATGACAAATCTGTTTTGGGCAATGCGCTCTTTGAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99650:256..1002+ >mRNA_P-canaliculata_contig99650.24080.1 ID=mRNA_P-canaliculata_contig99650.24080.1|Name=mRNA_P-canaliculata_contig99650.24080.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1494bp|location=Sequence derived from alignment at P-canaliculata_contig99650:256..1002+ (Pelvetia canaliculata dioecious)
GTCACGACCAAAAGAACTAAGGATAGGTCGGCAGGCATCATCCCGGCCGA
TCGTCTTTTAACGCTAGGAGTGATTGCGAAAAGCGTTTTGAATCGGGGAG
CGGCGTCTTTCCAACGGCTGTTGCCGAACATCAATTGGCGAAGAGATGTG
GCGTACCTAAAACGGAAAGGAGTTCTTGAATCCAAAGACGGAAAGCTATT
CGTCGATCCAAAAACTAAACGAGTAATGTTTTCGGCCGAAGGCTTCACTG
ACCGTGTCAAGGCAGTCTGGATTGATGGCCTTGAAAAATTGAAGCATCAT
CCTGACGCATTGGCAGAACTGGCTCTCCACTATATCGGAACGAAAGAAAG
TTGGAAATCGGCTCAACTTTTGATTGATTCGGTGCGTTACGTTAAGCCTC
GATTTTGGGACGAACTCTATTGCGACGCACTTGAACGTTTTGACAAAGAC
CTTTTTCGCTTCATTCGCGAGTCACCCATTTCCAAAGTCGAAATTCGTCA
TGCTGTTTGCCAATACAAAATCAACCTTGGCGAATTTGAAGAAGGGATAG
TTTGGGCGAAGAAGATGCGCGCCTTGGCAAGAAAACCTGGTTTTGAAAAA
TGGGCCGCAAAGTCGTATTTACTCACGGCAGAGTGCAATCGAAAACTTTG
TCAAGCAAACGAAGCAACGCGCGCATACGACCATGCGATCCATATTGCAG
ATAACGTAAAAGATGACAAATCTGTTTTGGGCAATGCGCTCTTTGAGGTC
ACGACCAAAAGAACTAAGGATAGGTCGGCAGGCATCATCCCGGCCGATCG
TCTTTTAACGCTAGGAGTGATTGCGAAAAGCGTTTTGAATCGGGGAGCGG
CGTCTTTCCAACGGCTGTTGCCGAACATCAATTGGCGAAGAGATGTGGCG
TACCTAAAACGGAAAGGAGTTCTTGAATCCAAAGACGGAAAGCTATTCGT
CGATCCAAAAACTAAACGAGTAATGTTTTCGGCCGAAGGCTTCACTGACC
GTGTCAAGGCAGTCTGGATTGATGGCCTTGAAAAATTGAAGCATCATCCT
GACGCATTGGCAGAACTGGCTCTCCACTATATCGGAACGAAAGAAAGTTG
GAAATCGGCTCAACTTTTGATTGATTCGGTGCGTTACGTTAAGCCTCGAT
TTTGGGACGAACTCTATTGCGACGCACTTGAACGTTTTGACAAAGACCTT
TTTCGCTTCATTCGCGAGTCACCCATTTCCAAAGTCGAAATTCGTCATGC
TGTTTGCCAATACAAAATCAACCTTGGCGAATTTGAAGAAGGGATAGTTT
GGGCGAAGAAGATGCGCGCCTTGGCAAGAAAACCTGGTTTTGAAAAATGG
GCCGCAAAGTCGTATTTACTCACGGCAGAGTGCAATCGAAAACTTTGTCA
AGCAAACGAAGCAACGCGCGCATACGACCATGCGATCCATATTGCAGATA
ACGTAAAAGATGACAAATCTGTTTTGGGCAATGCGCTCTTTGAG back to top
|