Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 324 |
| Cds size | 324 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817355.1899574-CDS-P-canaliculata_contig99571:374..698 | 1622817355.1899574-CDS-P-canaliculata_contig99571:374..698 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99571 375..698 - |
| 1693495243.3724365-CDS-P-canaliculata_contig99571:374..698 | 1693495243.3724365-CDS-P-canaliculata_contig99571:374..698 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99571 375..698 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99571.24069.1 >prot_P-canaliculata_contig99571.24069.1 ID=prot_P-canaliculata_contig99571.24069.1|Name=mRNA_P-canaliculata_contig99571.24069.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=108bp
EPNDSPSQAELFTDVSGSLSETNGLASATDNDWYRFDAAAGEFSVTLTSV
AAEGELNIEIYDLAGKNLGGNYRVENSSTVSVTLDTAQEVRVFVYAKNGY
QGNAYDLS back to topmRNA from alignment at P-canaliculata_contig99571:375..698- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99571.24069.1 ID=mRNA_P-canaliculata_contig99571.24069.1|Name=mRNA_P-canaliculata_contig99571.24069.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=324bp|location=Sequence derived from alignment at P-canaliculata_contig99571:375..698- (Pelvetia canaliculata dioecious)
GAACCGAATGATTCTCCATCACAAGCCGAACTTTTCACCGATGTTTCCGG
ATCGCTCAGCGAAACCAACGGCCTCGCCAGCGCGACCGATAATGACTGGT
ATCGATTCGACGCGGCAGCGGGCGAGTTCTCCGTTACCTTGACTAGCGTT
GCTGCTGAGGGCGAGTTAAACATCGAGATCTACGATTTGGCCGGGAAGAA
TCTTGGCGGAAACTATCGAGTTGAAAACAGCTCGACCGTATCGGTGACGC
TCGATACAGCTCAAGAAGTACGCGTCTTTGTGTACGCAAAGAACGGATAT
CAAGGTAACGCGTACGATCTAAGT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99571:375..698- >mRNA_P-canaliculata_contig99571.24069.1 ID=mRNA_P-canaliculata_contig99571.24069.1|Name=mRNA_P-canaliculata_contig99571.24069.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at P-canaliculata_contig99571:375..698- (Pelvetia canaliculata dioecious)
GAACCGAATGATTCTCCATCACAAGCCGAACTTTTCACCGATGTTTCCGG
ATCGCTCAGCGAAACCAACGGCCTCGCCAGCGCGACCGATAATGACTGGT
ATCGATTCGACGCGGCAGCGGGCGAGTTCTCCGTTACCTTGACTAGCGTT
GCTGCTGAGGGCGAGTTAAACATCGAGATCTACGATTTGGCCGGGAAGAA
TCTTGGCGGAAACTATCGAGTTGAAAACAGCTCGACCGTATCGGTGACGC
TCGATACAGCTCAAGAAGTACGCGTCTTTGTGTACGCAAAGAACGGATAT
CAAGGTAACGCGTACGATCTAAGTGAACCGAATGATTCTCCATCACAAGC
CGAACTTTTCACCGATGTTTCCGGATCGCTCAGCGAAACCAACGGCCTCG
CCAGCGCGACCGATAATGACTGGTATCGATTCGACGCGGCAGCGGGCGAG
TTCTCCGTTACCTTGACTAGCGTTGCTGCTGAGGGCGAGTTAAACATCGA
GATCTACGATTTGGCCGGGAAGAATCTTGGCGGAAACTATCGAGTTGAAA
ACAGCTCGACCGTATCGGTGACGCTCGATACAGCTCAAGAAGTACGCGTC
TTTGTGTACGCAAAGAACGGATATCAAGGTAACGCGTACGATCTAAGT back to top
|