Homology
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Match:
A0A5C0E433_9PROT (DUF4365 domain-containing protein n=1 Tax=Aliarcobacter cryaerophilus TaxID=28198 RepID=A0A5C0E433_9PROT)
HSP 1 Score: 73.2 bits (178), Expect = 4.200e-11
Identity = 58/245 (23.67%), Postives = 116/245 (47.35%), Query Frame = 1
Query: 31 SKKLNAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELDPEYLQKPYWWQEMGSAFFQIHRYKASVGCYSKAISLGMADETLALRADALLHAGLYSKAADGF-EIYLRHKEKLTQEAGGSEFTPGLGGWYLKSWCINTVIENLEITERPSITRSLTYTGALDDIGAMINHLKMYGIWQKNI-------WFNVAIALGKSGDLEGSLVGFVMEAMINPSDMEAQGNALSLAMNTQNAFVMGHLM 741
++K++ A Y+Y AN +R + + Y KA++ + Y + Y ++EM + + R++ S CY K + L ++ L ADAL+ G Y ++ + F E + + KE + E W+LK + ++++L+I E+ + T + + + Y NI FN+AI+ + G++V F++ A++N D E+ N++ A+N Q+ V+ +++
Sbjct: 349 NEKMHLGIAYYNY--ANFLRM---KDLKKSFHFYNKALKYNTHYCTEDYIFKEMAGLLWDLDRFEMSAKCYKKGLELKEDLNSIVLYADALMFQGKYLESKNKFIEYFEKKKEDIHPE------------WHLKESILGIIVDDLKIKEQKRNYKKAMNTKTIKNCNGQKIPDEEYEFIIDNIDALNPLCHFNLAISCSNEDEHFGTMVHFLISALVNRKDKESWLNSIKGALNCQSYNVIPNMI 576
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Match:
X1KIJ1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1KIJ1_9ZZZZ)
HSP 1 Score: 52.8 bits (125), Expect = 5.180e-5
Identity = 23/70 (32.86%), Postives = 38/70 (54.29%), Query Frame = 1
Query: 43 NAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELDPEYLQKPYWWQEMGSAFFQIHRYKASVGCYSKA 252
N + A + Y+ AN R+ + R +++Y +A L+P+YL + YWW E+ F + Y + CY KA
Sbjct: 87 NILKAVFSYNLANSYRS--SHNVRKAIKYYMQAKRLEPDYLNRDYWWYELAGVLFMVKHYGWAESCYLKA 154
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 4.20e-11 / Id = 23.67 Expect = 5.18e-5 / Id = 32.86 Sequence A0A5C0E433_9PROT X1KIJ1_9ZZZZ
Match Name E-value Identity Description
A0A5C0E433_9PROT 4.200e-11 23.67 DUF4365 domain-containing protein n=1 Tax=Aliarcob... [more] X1KIJ1_9ZZZZ 5.180e-5 32.86 Uncharacterized protein n=1 Tax=marine sediment me... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Bacteria Seed ortholog score 61.2 Seed ortholog evalue 7.9e-07 Seed eggNOG ortholog 1218108.KB908302_gene2783 EggNOG free text desc. Domain of unknown function (DUF4365) EggNOG OGs 1I3G5@117743,4NKSS@976,COG0457@1,COG0457@2 COG Functional cat. S Best tax level Flavobacteriia Best eggNOG OG NA|NA|NA Hectar predicted targeting category other localisation Exons 1 Model size 765 Cds size 762 Stop 0 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817354.501883-UTR-P-canaliculata_contig99515:279..282 1622817354.501883-UTR-P-canaliculata_contig99515:279..282 Pelvetia canaliculata dioecious UTR P-canaliculata_contig99515 280..282 + 1693495242.875545-UTR-P-canaliculata_contig99515:279..282 1693495242.875545-UTR-P-canaliculata_contig99515:279..282 Pelvetia canaliculata dioecious UTR P-canaliculata_contig99515 280..282 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817354.5159082-CDS-P-canaliculata_contig99515:282..1044 1622817354.5159082-CDS-P-canaliculata_contig99515:282..1044 Pelvetia canaliculata dioecious CDS P-canaliculata_contig99515 283..1044 + 1693495242.888409-CDS-P-canaliculata_contig99515:282..1044 1693495242.888409-CDS-P-canaliculata_contig99515:282..1044 Pelvetia canaliculata dioecious CDS P-canaliculata_contig99515 283..1044 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99515.24061.1
>prot_P-canaliculata_contig99515.24061.1 ID=prot_P-canaliculata_contig99515.24061.1|Name=mRNA_P-canaliculata_contig99515.24061.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=254bp
MLRLADEFESKKLNAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELD back to top mRNA from alignment at P-canaliculata_contig99515:280..1044+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99515.24061.1 ID=mRNA_P-canaliculata_contig99515.24061.1|Name=mRNA_P-canaliculata_contig99515.24061.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=765bp|location=Sequence derived from alignment at P-canaliculata_contig99515:280..1044+ (Pelvetia canaliculata dioecious)CTC ATGCTCCGTCTTGCGGATGAGTTTGAATCTAAAAAATTAAATGCGGT
TGCGGCGTCATACCACTATTCTGCAGCTAACGTAATTAGAACCTACCGTG
ATGAAAGCAAACGCAGTTGCGTTCGACATTATCGTAAAGCTGTTGAACTA
GATCCTGAGTATTTGCAGAAGCCGTACTGGTGGCAAGAGATGGGTTCCGC
TTTCTTTCAAATACACAGATACAAGGCCTCGGTAGGTTGTTACAGCAAAG
CTATATCTTTAGGCATGGCTGACGAGACTCTAGCATTGAGGGCCGATGCA
TTACTTCATGCTGGGCTATACAGCAAGGCTGCTGATGGTTTCGAAATCTA
CTTGCGACATAAGGAAAAGCTGACGCAGGAAGCAGGAGGCAGCGAATTTA
CACCAGGATTAGGTGGCTGGTATCTAAAGAGCTGGTGCATAAACACTGTC
ATTGAAAACCTAGAAATTACAGAGAGACCATCAATCACCAGATCATTAAC
TTACACTGGTGCGCTGGATGACATAGGTGCCATGATTAATCATTTAAAGA
TGTATGGCATATGGCAAAAAAATATATGGTTTAACGTAGCGATCGCTTTG
GGCAAGAGTGGGGATTTAGAAGGGTCTCTAGTTGGTTTTGTAATGGAAGC
TATGATCAATCCTAGCGACATGGAAGCTCAGGGAAACGCATTGAGTTTGG
CAATGAATACTCAGAACGCTTTCGTTATGGGTCACCTAATGGACGAAGTA
CCATTCCGACACGGG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99515:280..1044+
>mRNA_P-canaliculata_contig99515.24061.1 ID=mRNA_P-canaliculata_contig99515.24061.1|Name=mRNA_P-canaliculata_contig99515.24061.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at P-canaliculata_contig99515:280..1044+ (Pelvetia canaliculata dioecious) back to top