mRNA_P-canaliculata_contig995.24060.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig995.24060.1
Unique NamemRNA_P-canaliculata_contig995.24060.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: K8Z909_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z909_NANGC)

HSP 1 Score: 280 bits (716), Expect = 3.130e-87
Identity = 155/336 (46.13%), Postives = 217/336 (64.58%), Query Frame = 1
Query:   22 RAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLR---LTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEE---TAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMVRA 1011
            RAGF++  T +E++A+++LE+ALE  + +    ++ C LD  GP D V+D+SD  +W    Q   TV PG++GLY L F  C                           +V+FK+   F+N G     +YLSAG   LP L+   F  +  A+  WV   RR   HVH    MM  LLVFKTLS+LFE++R+   +   LTG A+ W++VYY+FAF+KGI  FVV+LLIGTGWSL+KP+L+ ++K+++LVVL+LQV++N A +VL+E   T+PGS  WL WR++ H++DIVCCC+IL PI+WSI+HLRQAA ADGK E+ +R+L +FR FY MV A
Sbjct:   70 RAGFLMHLTESETTARQDLEEALERLAAD----QEDCWLDHRGPNDEVIDLSDPESWAE-KQVQHTVAPGEEGLYSLIFVRCQ----------------------PAPSAVSFKIHAKFYNPG----PNYLSAGEAPLPTLYFVFFLCYLVAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQAYQKHGLTGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDREKKVVLVVLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFHLIDIVCCCAILFPIVWSIRHLRQAAAADGKMEHILRKLTLFRQFYLMVVA 374          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: W7TWZ9_9STRA (Transmembrane receptor, eukaryota n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWZ9_9STRA)

HSP 1 Score: 280 bits (716), Expect = 5.250e-87
Identity = 155/336 (46.13%), Postives = 217/336 (64.58%), Query Frame = 1
Query:   22 RAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLR---LTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEE---TAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMVRA 1011
            RAGF++  T +E++A+++LE+ALE  + +    ++ C LD  GP D V+D+SD  +W    Q   TV PG++GLY L F  C                           +V+FK+   F+N G     +YLSAG   LP L+   F  +  A+  WV   RR   HVH    MM  LLVFKTLS+LFE++R+   +   LTG A+ W++VYY+FAF+KGI  FVV+LLIGTGWSL+KP+L+ ++K+++LVVL+LQV++N A +VL+E   T+PGS  WL WR++ H++DIVCCC+IL PI+WSI+HLRQAA ADGK E+ +R+L +FR FY MV A
Sbjct:   89 RAGFLMHLTESETTARQDLEEALERLAAD----QEDCWLDHRGPNDEVIDLSDPESWAE-KQVQHTVAPGEEGLYSLIFVRCQ----------------------PAPSAVSFKIHAKFYNPG----PNYLSAGEAPLPTLYFVFFLCYLVAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQAYQKHGLTGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDREKKVVLVVLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFHLIDIVCCCAILFPIVWSIRHLRQAAAADGKMEHILRKLTLFRQFYLMVVA 393          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: D8LNF1_ECTSI (Related to G-protein coupled receptors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF1_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 6.090e-86
Identity = 163/344 (47.38%), Postives = 195/344 (56.69%), Query Frame = 1
Query:    1 VEGPEPYRAGFVVTKTSTESSAQEELEDALEGG-----SENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAG----GEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            VEGP+PYR+GFVV +T TESSAQEE+E+AL  G     + +GD  E  CLLDK GP D VL++SD++ WE G+QASRTVGPG++GLYVL +CGCP               + EG G     EEEH V+FKLRVAFWN+G  G+RDYLSAG E LP+LFLG F LF AAL+ W +C+RRH                                                                                        QV+NN+AQIVLEETAPGS VWLKWRNVL+VVDI+CCC IL+PI+WSI++LR A+LAD KA   IRRLNVF  FYKMV
Sbjct:   69 VEGPQPYRSGFVVKRTGTESSAQEEVENALAVGRPGSAAGSGDGGEPTCLLDKAGPGDLVLELSDKTAWEHGSQASRTVGPGEKGLYVLLYCGCP--------------VESEGGGVVVMAEEEHKVSFKLRVAFWNEGIGGDRDYLSAGSESLPELFLGTFVLFSAALVVWARCIRRHPS--------------------------------------------------------------------------------------QVLNNIAQIVLEETAPGSTVWLKWRNVLYVVDILCCCFILVPIIWSIRNLRDASLADSKA---IRRLNVFTGFYKMV 309          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A7S3UTH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTH5_HETAK)

HSP 1 Score: 271 bits (692), Expect = 1.760e-84
Identity = 158/332 (47.59%), Postives = 204/332 (61.45%), Query Frame = 1
Query:   13 EPYRAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGC-PGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            E  RAGF++ K  TES  ++++E  LE         +  CL+DK    DF LD+SD+S WE  +    T+  G +GLY L F  C P  V                          F+L + F N    G  +YLSAG   LP +++  F LF  AL+ WV  LR++   +      MT LLVFK LS+LFES+RYH++RLTG+ E WS+VY++FAF+KGI LFVV+LLIGTGWS++KPFLNK +K+II VVL LQVV NVA +VL E+APGS  +  WR VLH+VDI+CC  +L PI+WSI+H RQA  ADGKA  T+ RL  FR FY  V
Sbjct:   28 ETIRAGFLLRKEITESGEEQDIEKTLE---------KHECLIDKKSDHDFFLDMSDQSAWEEASM-KHTMPKGTEGLYTLVFVRCEPTRVA----------------------FTKFELDIDFMN----GPHNYLSAGDMPLPHIYMLSFFLFSGALITWVVYLRKNAGQIQKIHHTMTALLVFKVLSVLFESLRYHHMRLTGTTELWSVVYFVFAFVKGILLFVVILLIGTGWSMVKPFLNKMEKRIIFVVLCLQVVANVAMVVLGESAPGSESYSTWRGVLHLVDILCCAMVLFPIVWSIRHQRQAVEADGKAARTLERLRQFRQFYLAV 323          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A7S1TRC1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRC1_9STRA)

HSP 1 Score: 244 bits (623), Expect = 5.100e-73
Identity = 138/335 (41.19%), Postives = 206/335 (61.49%), Query Frame = 1
Query:   19 YRAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQAS--RTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHT----VHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            Y+ G ++ +TS++S++++ +++A E G+         CLLD     D ++D+SD  TW      +   TV  G++G Y L F  C                       + +H+V+F L+  F N G     DYLSAG   LP ++      F AAL  W+  LRR      VH+H    +M VL++FK +++LF+ +RY  +  TG A+ W++V+Y+F  L+ I+LFVV+LLIG GWSL+KP LN+++K+II  VL+LQV++N+A +V++ETAPGS  +L+WR+VLH+VDI+CCC+IL PI+WSI+HLRQ A  DGK    + RL  FR+FY MV
Sbjct:  140 YKVGLLMMRTSSKSASEQRVQEAAEEGT---------CLLDAAADDDVLIDLSDEETWSTPDVMNFEHTVPKGKEGFYSLVFNRCA---------------------PDGQHAVSFTLKAVFRNPG----PDYLSAGDGPLPTVYYCFAAAFAAALGVWMMVLRRSAPRTVVHIHK---LMAVLVMFKVMTLLFDGVRYQVIGHTGHADGWTVVFYIFTVLRSISLFVVILLIGMGWSLLKPSLNEREKKIIFFVLTLQVLDNIAFLVVDETAPGSQSYLQWRDVLHLVDIICCCAILFPIVWSIRHLRQGAGTDGKMAANLNRLETFRYFYIMV 437          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A6U1QGM8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QGM8_9STRA)

HSP 1 Score: 227 bits (578), Expect = 7.390e-69
Identity = 119/219 (54.34%), Postives = 159/219 (72.60%), Query Frame = 1
Query:  349 SVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            SVTFKL   F+N G     +YL+AG   LP L                           XXXXMM+VLL+FK +++LFESIR HY+++TG AE WS+VY++FAF+KG+ LFVV+LLIGTGWSL+KP+LN ++K+II+VVL+LQV++N+A ++LEET PG+  WL WR++LH+VDIVCCC++L PI+WSIKHLRQAA  DGKA   + +L++FR FY MV
Sbjct:    7 SVTFKLNFQFYNPG----PNYLTAGDAPLPHLLFAFXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVLLIFKCMTLLFESIRLHYIKVTGHAETWSVVYFIFAFVKGVMLFVVILLIGTGWSLVKPYLNDREKRIIVVVLTLQVIDNIAMVILEETTPGTQRWLNWRDILHLVDIVCCCAVLFPIVWSIKHLRQAAGTDGKAGAMLSKLSLFRGFYIMV 221          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: F0XVW2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW2_AURAN)

HSP 1 Score: 214 bits (544), Expect = 4.950e-64
Identity = 110/194 (56.70%), Postives = 142/194 (73.20%), Query Frame = 1
Query:  442 LFLGMFGLFFAALLFW--VQCLRRHT----VHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            LF   FGLF A  + W  V C           VH    +M  LLV K+L+M+ +++RYH++ +TGS E W +VYY+FA  KG+ LFVV+LLIGTGWSL+KP+LN ++K+I+LVVL LQVV+NVA +V EETAPGS  WL WR+VLH+VDI+CCC+IL PI+WSI+HLR+AA ADGK  N I +L +FR FY MV
Sbjct:    2 LFAVFFGLFLATSVLWGAVLCSGAKQGEAGTRVHGIHKLMGALLVLKSLTMMSQAMRYHFINVTGSGEGWEVVYYVFASAKGVMLFVVILLIGTGWSLVKPYLNDREKKIVLVVLVLQVVDNVALVVFEETAPGSQRWLTWRDVLHLVDIICCCAILFPIVWSIRHLREAAAADGKTRNNIAKLTLFRQFYIMV 195          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A5D6XNA0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNA0_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.280e-62
Identity = 127/332 (38.25%), Postives = 187/332 (56.33%), Query Frame = 1
Query:   22 RAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQ---GLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSA-EAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMV 1005
            RAG +         A E+L+DA +GG+E        C+L         +D++D +TW      +           G Y L+F  C   +                        ++F +   F N    G  ++LSAG   LP ++L M   F AA   W++ LR +  H+H    +MTVL+VFKT+S+  ES+R++Y++  G     W+ VYY+F FLKG+TLF V+LLIG+GWSL+KP L+++DK ++ VVL+LQV++N A I LEETA G+  W+ WR++LH VD++CC  IL+PI+WSI+ LRQ+A  DGKA   +++L  FR FY  V
Sbjct:   74 RAGLLFVHEDALWDAMEQLQDARDGGAER------YCVLQNRSAAAAWIDLADEATWSLSRVVANDAAADDALVPGFYYLFFVQCTSGL-----------------------QLSFHMDADFRN----GALNFLSAGDSPLPAVYLAMSLAFLAAAGLWLRHLRANADHIHSVHHLMTVLVVFKTVSLFAESMRFYYMKTHGDTLTGWTEVYYVFVFLKGVTLFAVLLLIGSGWSLLKPHLSRRDKSVVSVVLALQVLSNTAMIALEETAVGTRSWVTWRDLLHAVDLLCCFGILVPIVWSIRTLRQSAFTDGKAHINLQKLTQFRAFYLAV 372          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A7S0X3E1_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X3E1_9CHLO)

HSP 1 Score: 214 bits (545), Expect = 2.910e-62
Identity = 130/336 (38.69%), Postives = 182/336 (54.17%), Query Frame = 1
Query:   22 RAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPGPTD-FVLDISDRSTWERGT-QASRTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVH----VHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMVRA 1011
            + GF +T +  E+  +E L D              GC+LD       F     D +  + GT + + T+ P + G Y L+F  C  N                         V+F + V   NK   GE+DYLSAG + LP L+L  F  + +A + W  CL R        V      M VL+VFK L++L +S  YH +R  G  E W+I YY F+ ++GI LF VV+LIGTGWS +KPFLN ++K++++VVL LQV  N+A I+L+E  P    W  WR++ H++DI+CCC+IL PI+WSIKHLR+AA  DGK    + +L +FR FY MV A
Sbjct:   76 KLGFFITTSEAETQLEEYLSDG-------------GCVLDNISVDKLFTFQDMDNNLKDNGTYRYTNTIAPEKAGEYSLFFANCEPNT-----------------------LVSFDITVELSNKLPSGEKDYLSAGEKPLPMLYLVAFFAYVSAGVAWFVCLWRANSTEEGGVRRIHHFMGVLIVFKCLTVLCQSGMYHLIRTRGDPEGWNIAYYFFSSMRGIFLFTVVVLIGTGWSFVKPFLNDREKKVLMVVLPLQVFANIATIILDEGGPAIKGWFTWRDIFHLLDIICCCAILFPIVWSIKHLREAAGTDGKKLRNMNKLILFRQFYVMVVA 375          
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Match: A0A067BNV7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BNV7_SAPPC)

HSP 1 Score: 213 bits (542), Expect = 4.690e-62
Identity = 124/295 (42.03%), Postives = 171/295 (57.97%), Query Frame = 1
Query:  130 CLLDKPGPTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGCPGNVGGGRNLGGTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFLGMFGLFFAALLFWVQCLRRHTVHVHXXXXMMTVLLVFKTLSMLFESIRYHYLRLTGSA-EAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQIILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMPIMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMVRA 1011
            C+LD   P    +D  D  TW       R      +G Y + F  C                      G  +  V+F +R  F N     + +YLSAG   +P ++L M  +F  A L W + L  +  H+H    MM VL+  KTLS+  ES+R++Y++  G    +W+ +YY+F FLKGI LFVV+LLIGTGWSL+KP LN  +KQII VVL LQV+NN+A +VL+E++ G+  W+ WR+V+H+VDIVCCC+IL PI+ SI+HLRQ A  DGKA   +++L  FR FY  V A
Sbjct:   86 CILDAQ-PATTRMDFDDEKTWHIAHPIER------EGFYYVLFAHC----------------------GAPDTEVSFSMRAVFKNP----DGNYLSAGDASVPLIYLLMSIVFLTAGLHWARVLHANMAHIHHIHYMMAVLVSVKTLSLFAESMRFYYMKAHGDTMTSWNEIYYVFMFLKGIMLFVVILLIGTGWSLLKPHLNPSEKQIIFVVLLLQVLNNIAVVVLQESSIGTQAWVGWRDVMHLVDIVCCCAILFPIVSSIRHLRQTAETDGKAHINLQKLTQFRSFYIAVVA 347          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig995.24060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K8Z909_NANGC3.130e-8746.13Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
W7TWZ9_9STRA5.250e-8746.13Transmembrane receptor, eukaryota n=2 Tax=Monodops... [more]
D8LNF1_ECTSI6.090e-8647.38Related to G-protein coupled receptors n=1 Tax=Ect... [more]
A0A7S3UTH5_HETAK1.760e-8447.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TRC1_9STRA5.100e-7341.19Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6U1QGM8_9STRA7.390e-6954.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XVW2_AURAN4.950e-6456.70Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5D6XNA0_9STRA2.280e-6238.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S0X3E1_9CHLO2.910e-6238.69Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A067BNV7_SAPPC4.690e-6242.03Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig995contigP-canaliculata_contig995:4819..7109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.6
Seed ortholog evalue1.6e-71
Seed eggNOG ortholog2880.D8LNF1
Preferred nameGPR107
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0006810,GO:0006897,GO:0006898,GO:0008150,GO:0012505,GO:0016020,GO:0016192,GO:0030135,GO:0030136,GO:0030276,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032050,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0070013,GO:0072583,GO:0097708,GO:0098657
EggNOG free text desc.clathrin heavy chain binding
EggNOG OGsKOG2569@1,KOG2569@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1042
Cds size1041
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig995.24060.1prot_P-canaliculata_contig995.24060.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig995 4819..7109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817354.4108403-CDS-P-canaliculata_contig995:4818..48991622817354.4108403-CDS-P-canaliculata_contig995:4818..4899Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 4819..4899 +
1693495242.8146696-CDS-P-canaliculata_contig995:4818..48991693495242.8146696-CDS-P-canaliculata_contig995:4818..4899Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 4819..4899 +
1622817354.4233649-CDS-P-canaliculata_contig995:5294..57321622817354.4233649-CDS-P-canaliculata_contig995:5294..5732Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 5295..5732 +
1693495242.8265066-CDS-P-canaliculata_contig995:5294..57321693495242.8265066-CDS-P-canaliculata_contig995:5294..5732Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 5295..5732 +
1622817354.4344592-CDS-P-canaliculata_contig995:5905..61631622817354.4344592-CDS-P-canaliculata_contig995:5905..6163Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 5906..6163 +
1693495242.8371587-CDS-P-canaliculata_contig995:5905..61631693495242.8371587-CDS-P-canaliculata_contig995:5905..6163Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 5906..6163 +
1622817354.445876-CDS-P-canaliculata_contig995:6472..66251622817354.445876-CDS-P-canaliculata_contig995:6472..6625Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 6473..6625 +
1693495242.8476896-CDS-P-canaliculata_contig995:6472..66251693495242.8476896-CDS-P-canaliculata_contig995:6472..6625Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 6473..6625 +
1622817354.4601102-CDS-P-canaliculata_contig995:6998..71091622817354.4601102-CDS-P-canaliculata_contig995:6998..7109Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 6999..7109 +
1693495242.8626354-CDS-P-canaliculata_contig995:6998..71091693495242.8626354-CDS-P-canaliculata_contig995:6998..7109Pelvetia canaliculata dioeciousCDSP-canaliculata_contig995 6999..7109 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig995.24060.1

>prot_P-canaliculata_contig995.24060.1 ID=prot_P-canaliculata_contig995.24060.1|Name=mRNA_P-canaliculata_contig995.24060.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=347bp
VEGPEPYRAGFVVTKTSTESSAQEELEDALEGGSENGDSIEDGCLLDKPG
PTDFVLDISDRSTWERGTQASRTVGPGQQGLYVLYFCGCPGNVGGGRNLG
GTFASKGEGAGGEEEHSVTFKLRVAFWNKGFEGERDYLSAGMEVLPKLFL
GMFGLFFAALLFWVQCLRRHTVHVHHIHHMMTVLLVFKTLSMLFESIRYH
YLRLTGSAEAWSIVYYLFAFLKGITLFVVVLLIGTGWSLIKPFLNKKDKQ
IILVVLSLQVVNNVAQIVLEETAPGSLVWLKWRNVLHVVDIVCCCSILMP
IMWSIKHLRQAALADGKAENTIRRLNVFRHFYKMVRAEGGHYFFVL*
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mRNA from alignment at P-canaliculata_contig995:4819..7109+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig995.24060.1 ID=mRNA_P-canaliculata_contig995.24060.1|Name=mRNA_P-canaliculata_contig995.24060.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2291bp|location=Sequence derived from alignment at P-canaliculata_contig995:4819..7109+ (Pelvetia canaliculata dioecious)
GTTGAGGGTCCCGAGCCATATCGCGCGGGCTTCGTCGTTACCAAGACGAG CACAGAAAGCTCTGCTCAGGAGGAACTCGAGGTGAAGCGTATGCCATGAC TCGAGACAGATCCGAGATAAACCACGATCTCCTTTGCTAGCGCGAGCCCT TTCCCCCTCAACCCCCCCTCCCCCCCCGTTTTCGATGGCTCCCATCTTCC GTTAGAACGACGGCTATTCCTGTGGACGGAAACGGCGTTTCAAAGTATTC ATAACCCTTACCGGACTTGTAAGCCTTACGGTTTTCAATTATGGGCATCT GACAGCGCCTCCTTCTCATTCCTCATCATGCGGCCGAAACGTGCGGTTCG TCGTAGCCTTAATCACCTATGCATCCGACATTAGAAGATGTCATTGTTTT GAACATCTCACCGAGATGTCATGAAACCTCGAGGAAAAATGCTTAGACAA GAGCGCGCCGGTCTGTGTCAATCCAGGATGCCCTGGAAGGCGGGTCGGAG AATGGTGACAGTATTGAAGACGGCTGCCTTCTTGACAAACCGGGGCCGAC CGACTTCGTTCTCGACATCAGCGACCGCTCCACGTGGGAGCGCGGCACAC AGGCCAGCCGTACGGTAGGTCCAGGGCAGCAGGGCCTCTACGTTCTGTAC TTCTGCGGCTGCCCGGGCAATGTGGGCGGGGGTCGAAATCTTGGGGGGAC GTTCGCGTCGAAGGGAGAAGGAGCGGGGGGCGAGGAAGAGCACAGTGTCA CGTTCAAGCTCAGGGTGGCATTCTGGAACAAAGGTTTCGAAGGAGAACGG GATTACCTTTCGGCGGGAATGGAGGTGCTACCGAAGCTTTTCCTCGGCAT GTTCGGATTGTTTTTCGCGGCACTGCTGTTCTGGGTGCAATGCTTGCGGC GACATACTGTGCACGTGAGTCAGTGGATTAGGGAACTCGTGGTGGAAATG AAATGACTAGGATCGACACTACTGTATTTGGCGCTTCGACGACGCCAATC GAAGAATATGTTATAGGTGGAGATCGGTCCGGAGTTAGCTGGACGATGAT CCCCATGCGCGCGTTTTCGCACACGGCACTGCCTTAGGTGCATCACATTC ACCATATGATGACGGTGCTCCTCGTGTTCAAGACTCTGTCGATGCTCTTC GAGTCGATTCGTTATCACTACCTGAGGTTAACCGGGTCCGCCGAGGCATG GAGCATCGTGTACTATCTCTTCGCGTTCCTCAAGGGCATCACGCTTTTCG TCGTCGTGCTGCTGATCGGGACAGGGTGGTCGCTTATCAAGCCCTTCCTG AACAAAAAGGATAAGCAAATAATACTGGTCGTTCTGTCCCTACAGGTAAA GATATTGAAAGAGGCACTGGGACGGGGACGGAAGGGTCATTTTTTTGCCG ATTGTACCGAAAATTGCGTTGAATCGGCGCTGTCTGCTCGCAGGTTGAGC CGGCAAGTTATTAATAGTCAAAGGATAGGAAACCCCGGTGTGGCACGTAT GTTTTATTGAGACGTGTACATGAAAGAGCGCGGGGTGGGTGTTAAATTTT GCGACCTATAATTTTCACTGGTGAGCAGAACGATTGGTGCTGTGATTGCT GTGATTCGCGTACGCCATGATACCATGTGGTGTCTTGACATACCGCGGGA ACAGGTCGTCAATAACGTGGCACAAATTGTGCTCGAAGAAACCGCGCCTG GCTCCCTTGTGTGGCTCAAGTGGCGTAATGTCCTGCACGTGGTGGACATC GTCTGCTGCTGCTCCATTCTCATGCCGATCATGTGGTCCATCAAGCATCT TCGTCAGGTGGAACGAAAAATGTAATACAGTATAGTACAGGGGGGGAGCA TGGAACGGTATGCTGACCTGAAAAACATATAAAACCCGTGAACACGGAGA GGATTAGCGAATCCACTTCGTTCGGGTCATGGGTGTGTAGGGAGTTAGAT TTGATCGCCATCGGTCGTGCAACATGATACGGAAGCGTCCACAGGACCCA GCCCCACTTTCTCTAAATCGAAGTTATTAGTTGGTGCAAAAAGTTGAGTG GCTTGCGCTTAGCATTGGTCGGCAGAATATGCTTCGGTGCAGGAGCAAAG TTCAAGCGAAGTGCGACTTCTCAACTGCGACTCAGTCCAATTTATCTCTA ATCTTTGCCGTTTTCCCCATCTCTTCGCAGGCAGCACTGGCGGATGGCAA GGCGGAGAACACTATCCGTCGCCTCAATGTGTTCCGACATTTCTATAAAA TGGTAAGGGCGGAGGGCGGTCATTATTTCTTTGTGCTGTGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig995:4819..7109+

>mRNA_P-canaliculata_contig995.24060.1 ID=mRNA_P-canaliculata_contig995.24060.1|Name=mRNA_P-canaliculata_contig995.24060.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at P-canaliculata_contig995:4819..7109+ (Pelvetia canaliculata dioecious)
GTTGAGGGTCCCGAGCCATATCGCGCGGGCTTCGTCGTTACCAAGACGAG
CACAGAAAGCTCTGCTCAGGAGGAACTCGAGGTTGAGGGTCCCGAGCCAT
ATCGCGCGGGCTTCGTCGTTACCAAGACGAGCACAGAAAGCTCTGCTCAG
GAGGAACTCGAGGATGCCCTGGAAGGCGGGTCGGAGAATGGTGACAGTAT
TGAAGACGGCTGCCTTCTTGACAAACCGGGGCCGACCGACTTCGTTCTCG
ACATCAGCGACCGCTCCACGTGGGAGCGCGGCACACAGGCCAGCCGTACG
GTAGGTCCAGGGCAGCAGGGCCTCTACGTTCTGTACTTCTGCGGCTGCCC
GGGCAATGTGGGCGGGGGTCGAAATCTTGGGGGGACGTTCGCGTCGAAGG
GAGAAGGAGCGGGGGGCGAGGAAGAGCACAGTGTCACGTTCAAGCTCAGG
GTGGCATTCTGGAACAAAGGTTTCGAAGGAGAACGGGATTACCTTTCGGC
GGGAATGGAGGTGCTACCGAAGCTTTTCCTCGGCATGTTCGGATTGTTTT
TCGCGGCACTGCTGTTCTGGGTGCAATGCTTGCGGCGACATACTGTGCAC
GATGCCCTGGAAGGCGGGTCGGAGAATGGTGACAGTATTGAAGACGGCTG
CCTTCTTGACAAACCGGGGCCGACCGACTTCGTTCTCGACATCAGCGACC
GCTCCACGTGGGAGCGCGGCACACAGGCCAGCCGTACGGTAGGTCCAGGG
CAGCAGGGCCTCTACGTTCTGTACTTCTGCGGCTGCCCGGGCAATGTGGG
CGGGGGTCGAAATCTTGGGGGGACGTTCGCGTCGAAGGGAGAAGGAGCGG
GGGGCGAGGAAGAGCACAGTGTCACGTTCAAGCTCAGGGTGGCATTCTGG
AACAAAGGTTTCGAAGGAGAACGGGATTACCTTTCGGCGGGAATGGAGGT
GCTACCGAAGCTTTTCCTCGGCATGTTCGGATTGTTTTTCGCGGCACTGC
TGTTCTGGGTGCAATGCTTGCGGCGACATACTGTGCACGTGCATCACATT
CACCATATGATGACGGTGCTCCTCGTGTTCAAGACTCTGTCGATGCTCTT
CGAGTCGATTCGTTATCACTACCTGAGGTTAACCGGGTCCGCCGAGGCAT
GGAGCATCGTGTACTATCTCTTCGCGTTCCTCAAGGGCATCACGCTTTTC
GTCGTCGTGCTGCTGATCGGGACAGGGTGGTCGCTTATCAAGCCCTTCCT
GAACAAAAAGGATAAGCAAATAATACTGGTCGTTCTGTCCCTACAGGTGC
ATCACATTCACCATATGATGACGGTGCTCCTCGTGTTCAAGACTCTGTCG
ATGCTCTTCGAGTCGATTCGTTATCACTACCTGAGGTTAACCGGGTCCGC
CGAGGCATGGAGCATCGTGTACTATCTCTTCGCGTTCCTCAAGGGCATCA
CGCTTTTCGTCGTCGTGCTGCTGATCGGGACAGGGTGGTCGCTTATCAAG
CCCTTCCTGAACAAAAAGGATAAGCAAATAATACTGGTCGTTCTGTCCCT
ACAGGTCGTCAATAACGTGGCACAAATTGTGCTCGAAGAAACCGCGCCTG
GCTCCCTTGTGTGGCTCAAGTGGCGTAATGTCCTGCACGTGGTGGACATC
GTCTGCTGCTGCTCCATTCTCATGCCGATCATGTGGTCCATCAAGCATCT
TCGTCAGGTCGTCAATAACGTGGCACAAATTGTGCTCGAAGAAACCGCGC
CTGGCTCCCTTGTGTGGCTCAAGTGGCGTAATGTCCTGCACGTGGTGGAC
ATCGTCTGCTGCTGCTCCATTCTCATGCCGATCATGTGGTCCATCAAGCA
TCTTCGTCAGGCAGCACTGGCGGATGGCAAGGCGGAGAACACTATCCGTC
GCCTCAATGTGTTCCGACATTTCTATAAAATGGTAAGGGCGGAGGGCGGT
CATTATTTCTTTGTGCTGTGAGCAGCACTGGCGGATGGCAAGGCGGAGAA
CACTATCCGTCGCCTCAATGTGTTCCGACATTTCTATAAAATGGTAAGGG
CGGAGGGCGGTCATTATTTCTTTGTGCTGTGA
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